Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES00907 | Sorghum | cytosol | 87.02 | 90.24 |
| TraesCS3B01G231900.1 | Wheat | cytosol | 71.75 | 77.5 |
| Os01t0549200-02 | Rice | cytosol, peroxisome, plastid | 40.09 | 77.41 |
| TraesCS3A01G192600.2 | Wheat | cytosol | 71.47 | 77.2 |
| TraesCS3D01G202400.1 | Wheat | cytosol | 71.33 | 77.04 |
| HORVU3Hr1G046280.3 | Barley | cytosol | 71.33 | 77.04 |
| GSMUA_Achr4P13250_001 | Banana | cytosol | 49.5 | 56.06 |
| CDX81912 | Canola | nucleus | 16.83 | 47.01 |
| VIT_14s0066g00870.t01 | Wine grape | nucleus | 40.94 | 45.56 |
| Solyc06g071580.2.1 | Tomato | cytosol | 37.8 | 44.09 |
| VIT_17s0000g08750.t01 | Wine grape | nucleus | 43.22 | 42.74 |
| Bra031063.1-P | Field mustard | nucleus | 40.51 | 42.64 |
| AT1G19100.1 | Thale cress | nucleus | 39.66 | 41.93 |
| KRH03266 | Soybean | mitochondrion | 40.23 | 41.78 |
| CDY21683 | Canola | nucleus | 38.09 | 41.46 |
| KRH63565 | Soybean | cytosol | 40.51 | 41.28 |
| Zm00001d024625_P002 | Maize | cytosol | 34.52 | 41.02 |
| Zm00001d043191_P005 | Maize | cytosol | 42.8 | 40.65 |
| CDY41018 | Canola | nucleus | 39.23 | 40.44 |
| Solyc01g099300.2.1 | Tomato | nucleus | 41.08 | 40.39 |
| Zm00001d012575_P001 | Maize | mitochondrion, nucleus | 42.08 | 39.33 |
| CDX81913 | Canola | nucleus | 20.83 | 38.93 |
| Zm00001d053269_P001 | Maize | cytosol | 12.7 | 34.1 |
| Zm00001d004118_P003 | Maize | nucleus | 35.38 | 31.08 |
| Zm00001d045978_P002 | Maize | cytosol | 40.51 | 29.07 |
| Zm00001d053268_P001 | Maize | cytosol | 16.55 | 22.05 |
| Zm00001d046722_P007 | Maize | cytosol | 18.54 | 15.51 |
Protein Annotations
| EnsemblPlants:Zm00001d044506_P006 | EnsemblPlants:Zm00001d044506_T006 | EnsemblPlantsGene:Zm00001d044506 | EntrezGene:103651618 | Gene3D:3.30.565.10 | InterPro:HATPase_C |
| InterPro:HATPase_C_sf | InterPro:IPR036890 | ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF46 | PFAM:PF13589 |
| ProteinID:ONM41437.1 | SEG:seg | SUPFAM:SSF55874 | UniParc:UPI0008452A80 | UniProt:A0A1D6NMN2 | MapMan:12.5.1.2 |
Description
Protein MICRORCHIDIA 6
Coordinates
chr3:+:230164275..230185159
Molecular Weight (calculated)
78706.5 Da
IEP (calculated)
8.161
GRAVY (calculated)
-0.305
Length
701 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLGAEVIEL SSDEDEEPVP STTALIHHAP SSPPDVKPHL LADVDVKPLL LLPPPLHPPG YGALVPVKTE EPVPVATVSS PPRALPPPRL CRQFWKSGDY
101: VVARRNPDVA GPGGRNRLRI NPKFLHSNAT SHKWAFGAIA ELLDNAIDEV NNGATFVRVN KFKNPRDGNP SLLVQDDGGG MDPEALRRCM SFGFSDKQSD
201: AFIGQYGNGF KTSTMRLGAD VIVFTQNQNN WVPTRSIGLL SYTFLMETGC DDVLVPTVDY QYDLTTTSYV QMLRHDQKLF SSNLAILLKW SPFSTEAELL
301: KQFDDMGDHG TKIIVFNLWF NDDGDMELDF NSDKKDILIT GAHKKVKTNS LDKIAAQNYV STRLRYSLRA YASILYLHVP DTFRIILRGC DVEPHNVVND
401: LMYRECVLYK PQIAGLTESS VITTIGFVKG APDIDVQGFN VYHKNRLILP FWKVANNSYG KGRGVVGILE ANFIKPTHDK QDFEKSVLYQ RLEFRLKEMT
501: YEYWDLHCHR VGYDNKKLPK ATRAINRANH MNGGSSPTSA PPRLLAVDIP TSSSSIPRLS ASAAREKISS LDSLPKSMIG LKRKFNPFGA VAASADQDGL
601: HHMDKIDVSQ RRRFNEYKTL TLENDKLRNE CLQYEGSEKQ LVLKPQLVER LKYLAMCLSP LQPWLVERLK WLACKIVCSF GSCWLILDPD WRPLVISQCS
701: L
101: VVARRNPDVA GPGGRNRLRI NPKFLHSNAT SHKWAFGAIA ELLDNAIDEV NNGATFVRVN KFKNPRDGNP SLLVQDDGGG MDPEALRRCM SFGFSDKQSD
201: AFIGQYGNGF KTSTMRLGAD VIVFTQNQNN WVPTRSIGLL SYTFLMETGC DDVLVPTVDY QYDLTTTSYV QMLRHDQKLF SSNLAILLKW SPFSTEAELL
301: KQFDDMGDHG TKIIVFNLWF NDDGDMELDF NSDKKDILIT GAHKKVKTNS LDKIAAQNYV STRLRYSLRA YASILYLHVP DTFRIILRGC DVEPHNVVND
401: LMYRECVLYK PQIAGLTESS VITTIGFVKG APDIDVQGFN VYHKNRLILP FWKVANNSYG KGRGVVGILE ANFIKPTHDK QDFEKSVLYQ RLEFRLKEMT
501: YEYWDLHCHR VGYDNKKLPK ATRAINRANH MNGGSSPTSA PPRLLAVDIP TSSSSIPRLS ASAAREKISS LDSLPKSMIG LKRKFNPFGA VAASADQDGL
601: HHMDKIDVSQ RRRFNEYKTL TLENDKLRNE CLQYEGSEKQ LVLKPQLVER LKYLAMCLSP LQPWLVERLK WLACKIVCSF GSCWLILDPD WRPLVISQCS
701: L
001: MSHDRSVNVS HDAVIAKPER GTMLQSFSPR SHGSKGYSLP QDSEENRGSV GQSAGQSSTS VVDQVRSPAD DAGVTSSSTI CPAPVCRQFW KAGSYNDELS
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
Arabidopsis Description
MORC6Protein MICRORCHIDIA 6 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.