Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plastid 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G231900.1 | Wheat | cytosol | 80.17 | 44.84 |
| TraesCS3A01G192600.2 | Wheat | cytosol | 80.17 | 44.84 |
| CDX81912 | Canola | nucleus | 30.85 | 44.62 |
| TraesCS3D01G202400.1 | Wheat | cytosol | 79.61 | 44.53 |
| HORVU3Hr1G046280.3 | Barley | cytosol | 79.34 | 44.38 |
| EES00907 | Sorghum | cytosol | 79.06 | 42.46 |
| Zm00001d044506_P006 | Maize | cytosol | 77.41 | 40.09 |
| Os11t0454800-01 | Rice | cytosol | 44.08 | 35.32 |
| GSMUA_Achr4P13250_001 | Banana | cytosol | 54.27 | 31.83 |
| VIT_14s0066g00870.t01 | Wine grape | nucleus | 44.35 | 25.56 |
| KRH03266 | Soybean | mitochondrion | 47.11 | 25.33 |
| Solyc06g071580.2.1 | Tomato | cytosol | 41.05 | 24.79 |
| KRH63565 | Soybean | cytosol | 46.28 | 24.42 |
| VIT_17s0000g08750.t01 | Wine grape | nucleus | 47.11 | 24.12 |
| AT1G19100.1 | Thale cress | nucleus | 43.8 | 23.98 |
| Bra031063.1-P | Field mustard | nucleus | 43.53 | 23.72 |
| Os10t0181700-01 | Rice | cytosol, plastid | 38.57 | 22.99 |
| CDY41018 | Canola | nucleus | 42.98 | 22.94 |
| CDY21683 | Canola | nucleus | 39.94 | 22.52 |
| Solyc01g099300.2.1 | Tomato | nucleus | 43.53 | 22.16 |
| Os02t0469300-02 | Rice | nucleus | 37.74 | 17.06 |
| Os06t0622000-01 | Rice | cytosol | 22.31 | 10.23 |
| CDX81913 | Canola | nucleus | 6.34 | 6.13 |
| Os04t0311100-01 | Rice | cytosol, nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os01t0549200-02 | EnsemblPlantsGene:Os01g0549200 | Gene3D:3.30.565.10 | InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:IPR036890 |
| PANTHER:PTHR23336 | PANTHER:PTHR23336:SF44 | PFAM:PF13589 | ProteinID:BAS72622.1 | SEG:seg | SUPFAM:SSF55874 |
| UniParc:UPI0000DD8B83 | UniProt:A0A0P0V424 | MapMan:12.5.1.2 | : | : | : |
Description
Hypothetical conserved gene. (Os01t0549200-01);ATPase-like, ATP-binding domain domain containing protein. (Os01t0549200-02);Hypothetical conserved gene. (Os01t0549200-03)
Coordinates
chr1:-:20489205..20501754
Molecular Weight (calculated)
39328.3 Da
IEP (calculated)
4.553
GRAVY (calculated)
-0.173
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSTAAAADV IDLSSDDDDE VPVPSTSAAA AAAARRVAPS TSPRDVTPYA LVDVKPALLY PLQPPGVVVG GSGALVPVKE ELPVLTPVPL LAAGYSPSTP
101: STKVALPAPR LCRQFWKSGD YVVAQRNPDA DAPGGRNRLR INPRFLHSNA TSHKWAFGAI AELLDNAIDE VNTGATFVRV NEFTNPRDGS SSLLIQDDGG
201: GMDPEALRRC MSFGFSDKQS DALIGQYGNG FKTSTMRLGA DVIVFTQNQN NWVPTRSIGL LSYTFLMETG CDDVLVPTVD YQYDISTASY TQMLRHDQKL
301: FSSNLAILLK WSPFASEAEL LKQFDDIGEH GTKIIVFNLW FNDDGDMELD FNSDKKVSNA GIF
101: STKVALPAPR LCRQFWKSGD YVVAQRNPDA DAPGGRNRLR INPRFLHSNA TSHKWAFGAI AELLDNAIDE VNTGATFVRV NEFTNPRDGS SSLLIQDDGG
201: GMDPEALRRC MSFGFSDKQS DALIGQYGNG FKTSTMRLGA DVIVFTQNQN NWVPTRSIGL LSYTFLMETG CDDVLVPTVD YQYDISTASY TQMLRHDQKL
301: FSSNLAILLK WSPFASEAEL LKQFDDIGEH GTKIIVFNLW FNDDGDMELD FNSDKKVSNA GIF
001: MSHDRSVNVS HDAVIAKPER GTMLQSFSPR SHGSKGYSLP QDSEENRGSV GQSAGQSSTS VVDQVRSPAD DAGVTSSSTI CPAPVCRQFW KAGSYNDELS
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
Arabidopsis Description
MORC6Protein MICRORCHIDIA 6 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.