Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG20380 | Sorghum | cytosol | 72.6 | 72.88 |
| TraesCS7B01G299600.1 | Wheat | cytosol | 68.94 | 71.84 |
| TraesCS7D01G393200.1 | Wheat | cytosol | 68.43 | 71.32 |
| TraesCS7A01G399000.1 | Wheat | cytosol | 67.93 | 70.88 |
| HORVU7Hr1G093640.3 | Barley | cytosol | 30.56 | 69.34 |
| Zm00001d046722_P007 | Maize | cytosol | 71.97 | 68.02 |
| HORVU1Hr1G080470.5 | Barley | cytosol | 59.6 | 61.22 |
| GSMUA_Achr1P16580_001 | Banana | cytosol, nucleus, peroxisome | 47.85 | 58.85 |
| VIT_04s0044g01710.t01 | Wine grape | plastid | 39.65 | 53.13 |
| KRH76501 | Soybean | cytosol | 43.94 | 50.66 |
| Solyc02g082290.2.1 | Tomato | cytosol | 42.17 | 48.69 |
| Os01t0549200-02 | Rice | cytosol, peroxisome, plastid | 10.23 | 22.31 |
| Os11t0454800-01 | Rice | cytosol | 12.37 | 21.63 |
| Os10t0181700-01 | Rice | cytosol, plastid | 14.39 | 18.72 |
| Os02t0469300-02 | Rice | nucleus | 15.53 | 15.32 |
| Os04t0311100-01 | Rice | cytosol, nucleus | 0.25 | 3.17 |
Protein Annotations
| MapMan:12.5.1.2 | Gene3D:3.30.40.100 | Gene3D:3.30.565.10 | EntrezGene:4341550 | ProteinID:BAD35369.1 | ProteinID:BAF20010.1 |
| ProteinID:BAS98667.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008270 | InterPro:HATPase_C | InterPro:HATPase_C_sf |
| InterPro:IPR011124 | InterPro:IPR036890 | EnsemblPlantsGene:Os06g0622000 | EnsemblPlants:Os06t0622000-01 | PFAM:PF07496 | PFAM:PF13589 |
| PFscan:PS51050 | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF11 | UniProt:Q69XV8 | SUPFAM:SSF55874 | UniParc:UPI0000403787 |
| RefSeq:XP_015641047.1 | InterPro:Znf_CW | SEG:seg | : | : | : |
Description
Zinc finger, CW-type domain containing protein. (Os06t0622000-01)
Coordinates
chr6:-:24986845..24997890
Molecular Weight (calculated)
90111.3 Da
IEP (calculated)
7.671
GRAVY (calculated)
-0.712
Length
792 amino acids
Sequence
(BLAST)
(BLAST)
001: MADETLDLNE PPHENQGGGL NYVLLQKDSK NICRTKVCDI PVKVPSVWSI VRFVPTKVYQ QCDFLKFSLL PEPEDDRQNI EWGKFMRFLW DNQRVAVVRF
101: SSFALHIFPP QSHESHERPN FSHAVVMYEQ KDPGDCKPMA GVSDALKRSY RSDFQSGSMN PKSYLREEIC DSGPNPKEMN ASRVTELHKS VPESSPCESV
201: EDGPRILDPI VKKRTTTLAK NFVSTDPSYL RTLSQTHAGW VFGAIAELID NSRDADASRL NISVKSLFSK KADKKIPVLS VIDDGHGMTC AEMMRMISFG
301: HKRPDKQRQD QIGRFGIGFK TGAMKLGRDA IVLTQTSSSR SVAFLSQSFN ENKDNLEIPV VTYRKEGQYM EVDSSVQSEA TAEYNLNAIK EFSPFNEYFI
401: GEKLGIFGED GTGTQIYIWN LDRWGADYTL DWSSGKPSED PVHHGRGDIL IRSRRVRLRP GQTSNNVPLD YSLQSYLEVM FLNPRMKISV QGSSVKTRPL
501: AKTLNKTSVI SGEIMGRTIQ LTLGRSNVEW DRMNCGIFLY WHGRLIESYK RVGGQKHNAD MGRGVIGVAD ITDLIDDEDG NSWVLNSKQG FQDCEMYAKL
601: EEWLGRKADE YWDTNFDTLE LRKGSERYKA DHEWVQCYSC RKWRILNAGF DTKSLPDEWF CYMPPFNGKC EVAEQQMARG VIVIGEKRSE HDKRDRITQQ
701: EEVAKVNARE TRSDDSQSQK FTQDEDVKDV KLISTVVNKK RKSSNGTRSM DKNNSEDKHD DAEGDSSQTQ PGTPRPVLKR IRRGPARSCK QS
101: SSFALHIFPP QSHESHERPN FSHAVVMYEQ KDPGDCKPMA GVSDALKRSY RSDFQSGSMN PKSYLREEIC DSGPNPKEMN ASRVTELHKS VPESSPCESV
201: EDGPRILDPI VKKRTTTLAK NFVSTDPSYL RTLSQTHAGW VFGAIAELID NSRDADASRL NISVKSLFSK KADKKIPVLS VIDDGHGMTC AEMMRMISFG
301: HKRPDKQRQD QIGRFGIGFK TGAMKLGRDA IVLTQTSSSR SVAFLSQSFN ENKDNLEIPV VTYRKEGQYM EVDSSVQSEA TAEYNLNAIK EFSPFNEYFI
401: GEKLGIFGED GTGTQIYIWN LDRWGADYTL DWSSGKPSED PVHHGRGDIL IRSRRVRLRP GQTSNNVPLD YSLQSYLEVM FLNPRMKISV QGSSVKTRPL
501: AKTLNKTSVI SGEIMGRTIQ LTLGRSNVEW DRMNCGIFLY WHGRLIESYK RVGGQKHNAD MGRGVIGVAD ITDLIDDEDG NSWVLNSKQG FQDCEMYAKL
601: EEWLGRKADE YWDTNFDTLE LRKGSERYKA DHEWVQCYSC RKWRILNAGF DTKSLPDEWF CYMPPFNGKC EVAEQQMARG VIVIGEKRSE HDKRDRITQQ
701: EEVAKVNARE TRSDDSQSQK FTQDEDVKDV KLISTVVNKK RKSSNGTRSM DKNNSEDKHD DAEGDSSQTQ PGTPRPVLKR IRRGPARSCK QS
001: MSHDRSVNVS HDAVIAKPER GTMLQSFSPR SHGSKGYSLP QDSEENRGSV GQSAGQSSTS VVDQVRSPAD DAGVTSSSTI CPAPVCRQFW KAGSYNDELS
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
Arabidopsis Description
MORC6Protein MICRORCHIDIA 6 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.