Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
VIT_04s0044g01710.t01 | Wine grape | plastid | 47.81 | 55.5 |
KRH76501 | Soybean | cytosol | 52.48 | 52.4 |
GSMUA_Achr1P16580_001 | Banana | cytosol, nucleus, peroxisome | 45.92 | 48.91 |
HORVU7Hr1G093640.3 | Barley | cytosol | 23.91 | 46.99 |
TraesCS7D01G393200.1 | Wheat | cytosol | 47.81 | 43.16 |
TraesCS7B01G299600.1 | Wheat | cytosol | 47.81 | 43.16 |
TraesCS7A01G399000.1 | Wheat | cytosol | 47.67 | 43.08 |
KXG20380 | Sorghum | cytosol | 48.54 | 42.21 |
Os06t0622000-01 | Rice | cytosol | 48.69 | 42.17 |
HORVU1Hr1G080470.5 | Barley | cytosol | 44.46 | 39.56 |
Zm00001d046722_P007 | Maize | cytosol | 47.96 | 39.26 |
Solyc06g071580.2.1 | Tomato | cytosol | 17.2 | 19.63 |
Solyc02g084700.2.1 | Tomato | cytosol | 17.35 | 18.48 |
Solyc01g099300.2.1 | Tomato | nucleus | 17.35 | 16.69 |
Solyc01g009920.1.1 | Tomato | nucleus | 17.49 | 15.46 |
Solyc03g097520.2.1 | Tomato | nucleus | 18.51 | 15.23 |
Solyc10g081760.1.1 | Tomato | nucleus | 17.35 | 14.07 |
Protein Annotations
EnsemblPlants:Solyc02g082290.2.1 | EnsemblPlantsGene:Solyc02g082290.2 | Gene3D:3.30.40.100 | Gene3D:3.30.565.10 | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0008270 | InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:IPR011124 | InterPro:IPR036890 | InterPro:Znf_CW |
PANTHER:PTHR23336 | PANTHER:PTHR23336:SF11 | PFAM:PF07496 | PFAM:PF13589 | PFscan:PS51050 | SEG:seg |
SUPFAM:SSF55874 | UniParc:UPI0002767F10 | UniProt:K4BA99 | MapMan:12.5.1.2 | : | : |
Description
No Description!
Coordinates
chr2:+:45999045..46009479
Molecular Weight (calculated)
78078.1 Da
IEP (calculated)
8.420
GRAVY (calculated)
-0.586
Length
686 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKKDGKIIC STQCLNPPAN TPSIWNIKHI LRQDKFDFLS ELSRCLLRRS PENSHQEKEW HAFLGFLQKY KKVAIGEHEH FQFYILPPKE GSPFNYTFAC
101: YREREKPSEC PVGKASGSTS HVIEDACSPC NEEAVIGAQT CDLSAKVSGR PEKTNVQNIS LESNFVHANP SYLKTLGHTH SGWSFGAIAE FVDNSRDAKA
201: TKLEISIDII YSRVVGREIP MLCIIDDGCG MNHQEMLQMV SFGHKQPDAD DPNRIGRFGI GFKTGAMKLG KDALVLTQTT NSRSIAFLSQ TLNEGKDNLE
301: IPIVSYYRYG QFMELDKQNE TLFKHNLKAI KEFSPFDKYF IGQKVGLFSK DGTGTHIYIW NLEKWGPNYS LQWESGITGG SSFHQGDILI RSKRVRARPG
401: QMTQMVPLDY SLRSYLEVIF LDPRIKIYVQ KSQVKSRPLA RSLNRTVVEN GTIMGKPVQL TLGCNQLEWE EANCGIFLYW HGRLIEAYKR VGSMMHNGDR
501: GRGVIGVIDV TNLMAEDNGH VWVHNNKQGF QDCEVYAELE KWLGEKSDKY LDEHVDKVEL KPGSGVYKPD NEWVQCDKCR KWRMLSHGFN SKTLPLQWFC
601: YMKPFNGECE RSEQEVEPGV ITISSKRLGY SSTEDPEEIK RKLSRQAVGT SKNVGENDSS HSMDEDQAKK SPAQKRKRLL RSCRKS
101: YREREKPSEC PVGKASGSTS HVIEDACSPC NEEAVIGAQT CDLSAKVSGR PEKTNVQNIS LESNFVHANP SYLKTLGHTH SGWSFGAIAE FVDNSRDAKA
201: TKLEISIDII YSRVVGREIP MLCIIDDGCG MNHQEMLQMV SFGHKQPDAD DPNRIGRFGI GFKTGAMKLG KDALVLTQTT NSRSIAFLSQ TLNEGKDNLE
301: IPIVSYYRYG QFMELDKQNE TLFKHNLKAI KEFSPFDKYF IGQKVGLFSK DGTGTHIYIW NLEKWGPNYS LQWESGITGG SSFHQGDILI RSKRVRARPG
401: QMTQMVPLDY SLRSYLEVIF LDPRIKIYVQ KSQVKSRPLA RSLNRTVVEN GTIMGKPVQL TLGCNQLEWE EANCGIFLYW HGRLIEAYKR VGSMMHNGDR
501: GRGVIGVIDV TNLMAEDNGH VWVHNNKQGF QDCEVYAELE KWLGEKSDKY LDEHVDKVEL KPGSGVYKPD NEWVQCDKCR KWRMLSHGFN SKTLPLQWFC
601: YMKPFNGECE RSEQEVEPGV ITISSKRLGY SSTEDPEEIK RKLSRQAVGT SKNVGENDSS HSMDEDQAKK SPAQKRKRLL RSCRKS
001: MSHDRSVNVS HDAVIAKPER GTMLQSFSPR SHGSKGYSLP QDSEENRGSV GQSAGQSSTS VVDQVRSPAD DAGVTSSSTI CPAPVCRQFW KAGSYNDELS
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
Arabidopsis Description
MORC6Protein MICRORCHIDIA 6 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.