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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • plastid 1
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_04s0044g01710.t01 Wine grape plastid 47.81 55.5
KRH76501 Soybean cytosol 52.48 52.4
GSMUA_Achr1P16580_001 Banana cytosol, nucleus, peroxisome 45.92 48.91
HORVU7Hr1G093640.3 Barley cytosol 23.91 46.99
TraesCS7D01G393200.1 Wheat cytosol 47.81 43.16
TraesCS7B01G299600.1 Wheat cytosol 47.81 43.16
TraesCS7A01G399000.1 Wheat cytosol 47.67 43.08
KXG20380 Sorghum cytosol 48.54 42.21
Os06t0622000-01 Rice cytosol 48.69 42.17
HORVU1Hr1G080470.5 Barley cytosol 44.46 39.56
Zm00001d046722_P007 Maize cytosol 47.96 39.26
Solyc06g071580.2.1 Tomato cytosol 17.2 19.63
Solyc02g084700.2.1 Tomato cytosol 17.35 18.48
Solyc01g099300.2.1 Tomato nucleus 17.35 16.69
Solyc01g009920.1.1 Tomato nucleus 17.49 15.46
Solyc03g097520.2.1 Tomato nucleus 18.51 15.23
Solyc10g081760.1.1 Tomato nucleus 17.35 14.07
Protein Annotations
EnsemblPlants:Solyc02g082290.2.1EnsemblPlantsGene:Solyc02g082290.2Gene3D:3.30.40.100Gene3D:3.30.565.10GO:GO:0003674GO:GO:0005488
GO:GO:0008270InterPro:HATPase_CInterPro:HATPase_C_sfInterPro:IPR011124InterPro:IPR036890InterPro:Znf_CW
PANTHER:PTHR23336PANTHER:PTHR23336:SF11PFAM:PF07496PFAM:PF13589PFscan:PS51050SEG:seg
SUPFAM:SSF55874UniParc:UPI0002767F10UniProt:K4BA99MapMan:12.5.1.2::
Description
No Description!
Coordinates
chr2:+:45999045..46009479
Molecular Weight (calculated)
78078.1 Da
IEP (calculated)
8.420
GRAVY (calculated)
-0.586
Length
686 amino acids
Sequence
(BLAST)
001: MVKKDGKIIC STQCLNPPAN TPSIWNIKHI LRQDKFDFLS ELSRCLLRRS PENSHQEKEW HAFLGFLQKY KKVAIGEHEH FQFYILPPKE GSPFNYTFAC
101: YREREKPSEC PVGKASGSTS HVIEDACSPC NEEAVIGAQT CDLSAKVSGR PEKTNVQNIS LESNFVHANP SYLKTLGHTH SGWSFGAIAE FVDNSRDAKA
201: TKLEISIDII YSRVVGREIP MLCIIDDGCG MNHQEMLQMV SFGHKQPDAD DPNRIGRFGI GFKTGAMKLG KDALVLTQTT NSRSIAFLSQ TLNEGKDNLE
301: IPIVSYYRYG QFMELDKQNE TLFKHNLKAI KEFSPFDKYF IGQKVGLFSK DGTGTHIYIW NLEKWGPNYS LQWESGITGG SSFHQGDILI RSKRVRARPG
401: QMTQMVPLDY SLRSYLEVIF LDPRIKIYVQ KSQVKSRPLA RSLNRTVVEN GTIMGKPVQL TLGCNQLEWE EANCGIFLYW HGRLIEAYKR VGSMMHNGDR
501: GRGVIGVIDV TNLMAEDNGH VWVHNNKQGF QDCEVYAELE KWLGEKSDKY LDEHVDKVEL KPGSGVYKPD NEWVQCDKCR KWRMLSHGFN SKTLPLQWFC
601: YMKPFNGECE RSEQEVEPGV ITISSKRLGY SSTEDPEEIK RKLSRQAVGT SKNVGENDSS HSMDEDQAKK SPAQKRKRLL RSCRKS
Best Arabidopsis Sequence Match ( AT1G19100.1 )
(BLAST)
001: MSHDRSVNVS HDAVIAKPER GTMLQSFSPR SHGSKGYSLP QDSEENRGSV GQSAGQSSTS VVDQVRSPAD DAGVTSSSTI CPAPVCRQFW KAGSYNDELS
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
Arabidopsis Description
MORC6Protein MICRORCHIDIA 6 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y74]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.