Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400088594 | Potato | nucleus | 88.66 | 92.23 |
| Solyc10g081760.1.1 | Tomato | nucleus | 60.05 | 55.08 |
| Zm00001d053269_P001 | Maize | cytosol | 15.85 | 47.13 |
| Solyc03g097520.2.1 | Tomato | nucleus | 49.61 | 46.16 |
| GSMUA_Achr11P... | Banana | nucleus | 47.68 | 44.74 |
| CDY52039 | Canola | plastid | 39.56 | 44.69 |
| TraesCS2B01G291200.1 | Wheat | nucleus | 45.36 | 44.61 |
| EES10563 | Sorghum | nucleus | 45.23 | 44.54 |
| CDX84021 | Canola | plastid | 39.18 | 44.06 |
| AT5G13130.1 | Thale cress | nucleus | 39.95 | 43.79 |
| Zm00001d004118_P003 | Maize | nucleus | 44.97 | 43.73 |
| TraesCS2A01G273000.2 | Wheat | nucleus | 44.59 | 42.87 |
| KXG30181 | Sorghum | nucleus | 44.33 | 42.73 |
| HORVU2Hr1G066650.2 | Barley | cytosol | 43.56 | 42.04 |
| Os02t0469300-02 | Rice | nucleus | 42.65 | 41.22 |
| TraesCS2D01G272300.3 | Wheat | nucleus | 44.59 | 40.8 |
| CDX69668 | Canola | nucleus, plastid | 40.98 | 38.22 |
| CDX97228 | Canola | nucleus, plastid | 40.85 | 38.19 |
| Bra016690.1-P | Field mustard | plastid | 39.69 | 37.61 |
| Solyc02g084700.2.1 | Tomato | cytosol | 30.15 | 36.34 |
| Solyc06g071580.2.1 | Tomato | cytosol | 27.71 | 35.77 |
| Bra008854.1-P | Field mustard | nucleus, plastid | 28.22 | 35.21 |
| Zm00001d053268_P001 | Maize | cytosol | 20.88 | 30.8 |
| Solyc01g099300.2.1 | Tomato | nucleus | 28.09 | 30.57 |
| Solyc02g082290.2.1 | Tomato | cytosol | 15.46 | 17.49 |
Protein Annotations
| EnsemblPlants:Solyc01g009920.1.1 | EnsemblPlantsGene:Solyc01g009920.1 | Gene3D:3.30.565.10 | InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:IPR036890 |
| ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF7 | PFAM:PF13589 | SEG:seg | SUPFAM:SSF55874 |
| UniParc:UPI00027618F2 | UniProt:K4ATI7 | MapMan:12.5.1.2 | : | : | : |
Description
No Description!
Coordinates
chr1:-:4490206..4495395
Molecular Weight (calculated)
88338.9 Da
IEP (calculated)
7.041
GRAVY (calculated)
-0.695
Length
776 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSTHQIKQE IIDVDDENTS MICVNSSSGG IKGSNFSRFF DSDSEDDDND NDNDMRRSTL KKMKVEAALP VGFLDPLPPE ERLAFNKSLE VVVRNNNEFR
101: VSQEKVVVAS TKQFWKAGDY EGIDGGFAAG HAEGMDHVRV HPKFLHSNAT SHKWALGAFA ELLDNAMDEV CNGATYVSVD VLDNKKEKGK MILVEDNGGG
201: MTPDKMRQCM SLRYSAKSKL ANTIGQYGNG FKTSSMRLGG DVIVFSRCQG KDGLSTTQSV GMLSYTFLRN TGKEDIIVPM IDFVKRGEIW EMLVRSSVDD
301: WKRNSDTIVQ WSPFESEEDL FLQFELLDNQ GTRIIIYNLW EDEKGETELD FDTDPHDIQI KGVSRDEKKI EMAKIYPNSR HFLTYQHSLR VNMMNLSFYL
401: QTRDSCCKID FTFILLSYAS ILYLRLAPGF RIILRGEDVE HHNLVDDMNH AKKNTYRPQP IGDETSKDPN AVAVVTIGFV KDAEHHIDVQ GFSVYHKNRL
501: IKPFWRVWNA AGSDGRGAIG VLEANFVKPA HDKQDFERTI VLARLEARLQ FMQKQYWRDN CHEIGYADRR SVKHSVSSED ETNTSAKSNS CSRFSSNVHT
601: NSRNVHTTSR DAHTPSRDVP TTSRDVPTTS HDKSRSKCTG GEHKTGQVHS SIQATNQTMW RELSNRPTRQ ISTNLGVKIQ DTSSNLREED HVTKDRLQQA
701: LRDLQYERDK NKSLEGQLKA AQRLITDLNS NHDNLAHMLL EERKRSRESS VINQELRDKV KLLGKRMPFT SVKREH
101: VSQEKVVVAS TKQFWKAGDY EGIDGGFAAG HAEGMDHVRV HPKFLHSNAT SHKWALGAFA ELLDNAMDEV CNGATYVSVD VLDNKKEKGK MILVEDNGGG
201: MTPDKMRQCM SLRYSAKSKL ANTIGQYGNG FKTSSMRLGG DVIVFSRCQG KDGLSTTQSV GMLSYTFLRN TGKEDIIVPM IDFVKRGEIW EMLVRSSVDD
301: WKRNSDTIVQ WSPFESEEDL FLQFELLDNQ GTRIIIYNLW EDEKGETELD FDTDPHDIQI KGVSRDEKKI EMAKIYPNSR HFLTYQHSLR VNMMNLSFYL
401: QTRDSCCKID FTFILLSYAS ILYLRLAPGF RIILRGEDVE HHNLVDDMNH AKKNTYRPQP IGDETSKDPN AVAVVTIGFV KDAEHHIDVQ GFSVYHKNRL
501: IKPFWRVWNA AGSDGRGAIG VLEANFVKPA HDKQDFERTI VLARLEARLQ FMQKQYWRDN CHEIGYADRR SVKHSVSSED ETNTSAKSNS CSRFSSNVHT
601: NSRNVHTTSR DAHTPSRDVP TTSRDVPTTS HDKSRSKCTG GEHKTGQVHS SIQATNQTMW RELSNRPTRQ ISTNLGVKIQ DTSSNLREED HVTKDRLQQA
701: LRDLQYERDK NKSLEGQLKA AQRLITDLNS NHDNLAHMLL EERKRSRESS VINQELRDKV KLLGKRMPFT SVKREH
001: MEPIVKQENP VTTSTLSTWK PAARNKTIPP PESVIELSSS NEGSELGENL DEIAEIQSVD RTGGDDVSGT KRARSDSIAS PAKRLAVMIP DDDEEFLLST
101: TSGQAILALP ATPCNVVAAP SSWGSCKQFW KAGDYEGTSG GDWEVSAGGF DHVRVHPKFL HSNATSHKWS LGAFAELLDN ALDEVRSGAT FVNVDMIQNR
201: KDGSKMILIE DNGGGMNPEK MRHCMSLGYS AKSKLADTIG QYGNGFKTST MRLGADVIVF SRCLGKDGKS STQSIGLLSY TFLKSTGKED IVVPMLDYER
301: RDSEWCPITR SSVSDWEKNV ETVVQWSPYA TEEELLCQFN LMKKHGTRII IYNLWEDDEG MLELDFDTDP HDIQLRGVNR DDKNIVMASQ FPNSRHYLTY
401: KHSLRSYASI LYLKISHEFR IILRGKDVEH HNIVNDMMQT EKITYRPKEA ADGCAKYSNL SAVVTIGFVK DAKHHVDVQG FNVYHKNRLI KPFWRIWNAA
501: GSDGRGVIGV LEANFVEPAH DKQGFERTTV LSRLEARLLH MQKDYWRSKC HKIGYAKRQG RKSAKDTEKD TEDRESSPEF DPKGSASSRK RTVPSSFKTP
601: TAAPRFNTPT AASEKFNPRS NVNGGGKGSV KVSKDIGYKS SEKGGKLGNS FSKSNKRAKP QGARAVEVTN SDDDYDCDSS PERNVTELPG KSSELPKPQS
701: GPRTLSQLEQ ENNELRERLD KKEEVFLLLQ KDLRRERELR KTLEAEVETL KNKLKEMDKE QASLIDVFAE DRDRRDKEEE NLRIKLEEAS NTIQKLIDGK
801: ARGR
101: TSGQAILALP ATPCNVVAAP SSWGSCKQFW KAGDYEGTSG GDWEVSAGGF DHVRVHPKFL HSNATSHKWS LGAFAELLDN ALDEVRSGAT FVNVDMIQNR
201: KDGSKMILIE DNGGGMNPEK MRHCMSLGYS AKSKLADTIG QYGNGFKTST MRLGADVIVF SRCLGKDGKS STQSIGLLSY TFLKSTGKED IVVPMLDYER
301: RDSEWCPITR SSVSDWEKNV ETVVQWSPYA TEEELLCQFN LMKKHGTRII IYNLWEDDEG MLELDFDTDP HDIQLRGVNR DDKNIVMASQ FPNSRHYLTY
401: KHSLRSYASI LYLKISHEFR IILRGKDVEH HNIVNDMMQT EKITYRPKEA ADGCAKYSNL SAVVTIGFVK DAKHHVDVQG FNVYHKNRLI KPFWRIWNAA
501: GSDGRGVIGV LEANFVEPAH DKQGFERTTV LSRLEARLLH MQKDYWRSKC HKIGYAKRQG RKSAKDTEKD TEDRESSPEF DPKGSASSRK RTVPSSFKTP
601: TAAPRFNTPT AASEKFNPRS NVNGGGKGSV KVSKDIGYKS SEKGGKLGNS FSKSNKRAKP QGARAVEVTN SDDDYDCDSS PERNVTELPG KSSELPKPQS
701: GPRTLSQLEQ ENNELRERLD KKEEVFLLLQ KDLRRERELR KTLEAEVETL KNKLKEMDKE QASLIDVFAE DRDRRDKEEE NLRIKLEEAS NTIQKLIDGK
801: ARGR
Arabidopsis Description
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein [Source:TAIR;Acc:AT5G50780]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.