Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52039 | Canola | plastid | 62.01 | 63.9 |
| CDX84021 | Canola | plastid | 62.01 | 63.62 |
| CDX97228 | Canola | nucleus, plastid | 72.18 | 61.57 |
| CDX69668 | Canola | nucleus, plastid | 71.47 | 60.82 |
| Bra008854.1-P | Field mustard | nucleus, plastid | 48.87 | 55.63 |
| Bra016690.1-P | Field mustard | plastid | 62.15 | 53.72 |
| AT4G24970.1 | Thale cress | nucleus | 45.34 | 45.4 |
| PGSC0003DMT400088594 | Potato | nucleus | 43.5 | 41.29 |
| GSMUA_Achr11P... | Banana | nucleus | 47.18 | 40.39 |
| EES10563 | Sorghum | nucleus | 44.63 | 40.1 |
| Solyc01g009920.1.1 | Tomato | nucleus | 43.79 | 39.95 |
| TraesCS2B01G291200.1 | Wheat | nucleus | 44.21 | 39.67 |
| Zm00001d004118_P003 | Maize | nucleus | 44.35 | 39.35 |
| Zm00001d053269_P001 | Maize | cytosol | 14.41 | 39.08 |
| Solyc10g081760.1.1 | Tomato | nucleus | 46.61 | 39.01 |
| TraesCS2A01G273000.2 | Wheat | nucleus | 43.93 | 38.54 |
| KXG30181 | Sorghum | nucleus | 43.5 | 38.26 |
| AT5G50780.1 | Thale cress | nucleus | 43.93 | 37.97 |
| HORVU2Hr1G066650.2 | Barley | cytosol | 42.94 | 37.81 |
| Os02t0469300-02 | Rice | nucleus | 42.23 | 37.24 |
| TraesCS2D01G272300.3 | Wheat | nucleus | 43.93 | 36.67 |
| AT4G36280.1 | Thale cress | cytosol | 31.21 | 35.3 |
| PGSC0003DMT400072308 | Potato | nucleus | 46.75 | 35.14 |
| AT1G19100.1 | Thale cress | nucleus | 31.64 | 33.79 |
| AT4G36290.1 | Thale cress | cytosol | 30.08 | 33.54 |
| AT4G36270.1 | Thale cress | cytosol | 22.18 | 32.3 |
| Zm00001d053268_P001 | Maize | cytosol | 21.75 | 29.28 |
Protein Annotations
| MapMan:12.5.1.2 | Gene3D:3.30.565.10 | EntrezGene:831152 | UniProt:A0A178UK03 | ProteinID:AED91854.1 | ProteinID:AED91855.1 |
| ArrayExpress:AT5G13130 | EnsemblPlantsGene:AT5G13130 | RefSeq:AT5G13130 | TAIR:AT5G13130 | RefSeq:AT5G13130-TAIR-G | EnsemblPlants:AT5G13130.1 |
| TAIR:AT5G13130.1 | Unigene:At.54831 | ProteinID:CAC05441.1 | ncoils:Coil | UniProt:F4K2G3 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 |
| GO:GO:0004519 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006281 | GO:GO:0006282 | GO:GO:0006325 |
| GO:GO:0006950 | GO:GO:0006974 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016569 | GO:GO:0016740 | GO:GO:0016787 |
| GO:GO:0016887 | GO:GO:0031047 | GO:GO:0031935 | GO:GO:0040029 | GO:GO:0090305 | InterPro:HATPase_C |
| InterPro:HATPase_C_sf | InterPro:IPR036890 | RefSeq:NP_001190300.1 | RefSeq:NP_196817.2 | ProteinID:OAO94346.1 | PFAM:PF13589 |
| PANTHER:PTHR23336 | PANTHER:PTHR23336:SF7 | SUPFAM:SSF55874 | UniParc:UPI00017394C8 | SEG:seg | : |
Description
MORC5Protein MICRORCHIDIA 5 [Source:UniProtKB/Swiss-Prot;Acc:F4K2G3]
Coordinates
chr5:+:4166622..4170517
Molecular Weight (calculated)
80923.5 Da
IEP (calculated)
8.399
GRAVY (calculated)
-0.741
Length
708 amino acids
Sequence
(BLAST)
(BLAST)
001: MAESGSTNPK SPSVVPDSTL GGLKRDLRNY HDGDDSNNLS IKKSKTTKME NNCREIVPLD VTPLSIVPPD TPKLSRQFWK AGDDDEAAPV PLYCSNDAAV
101: RVHPQFLHAN ATSHKWALGA LAELLDNSLD EVSNGATYVH VDSTINKRDG KSSILIVEDN GGGMNPSTFR ECLSLGYSRK RNMANRVGQY GNGFKTSTMR
201: LGADAIVFSR SRGINGNNPT QSIGMLSYTF LYETRKCEAI VPTVDYELVD NKWKEIVYNS TNEWLDNLET ILRWSPYLSQ QDLLDQFNHL EEQGTRIVIY
301: NLWEDDEGKM ELDFDTDPHD IQLRGVNRDE KNIDMAKTYP NSRHFLTYRH SLRSYASILY LKRPDNFRII LRGEDVEHHS VLDDMMKIEE KTYKPMRSPE
401: WPDQEEMVAS LKLGFVKDAH HHIDIQGFNV YHKNRLIKPF WRVWNAAGSD GRGVIGILEA NFIQPAHNKQ GFERTVVLAK LESRLVTHQK NYWSSRCHEI
501: GYAPRRKQKN YESSVTETPR PFNNINVVKG SSSSTPVPVR VFRPNVEPSG RNQIPQVETR ERSFDINPEI GAKNRSYYGL GISSFKETGS VNLEAELQKV
601: KQESAKLVSE LQRQKQLLEL QLQESKAKIQ NLEKAQREKE VLELQLKESK ARIQNLENRQ EGVSTIFQQE RARRDVTEDG LRKKLREASD VIDGLRKQVD
701: TFKGKRIL
101: RVHPQFLHAN ATSHKWALGA LAELLDNSLD EVSNGATYVH VDSTINKRDG KSSILIVEDN GGGMNPSTFR ECLSLGYSRK RNMANRVGQY GNGFKTSTMR
201: LGADAIVFSR SRGINGNNPT QSIGMLSYTF LYETRKCEAI VPTVDYELVD NKWKEIVYNS TNEWLDNLET ILRWSPYLSQ QDLLDQFNHL EEQGTRIVIY
301: NLWEDDEGKM ELDFDTDPHD IQLRGVNRDE KNIDMAKTYP NSRHFLTYRH SLRSYASILY LKRPDNFRII LRGEDVEHHS VLDDMMKIEE KTYKPMRSPE
401: WPDQEEMVAS LKLGFVKDAH HHIDIQGFNV YHKNRLIKPF WRVWNAAGSD GRGVIGILEA NFIQPAHNKQ GFERTVVLAK LESRLVTHQK NYWSSRCHEI
501: GYAPRRKQKN YESSVTETPR PFNNINVVKG SSSSTPVPVR VFRPNVEPSG RNQIPQVETR ERSFDINPEI GAKNRSYYGL GISSFKETGS VNLEAELQKV
601: KQESAKLVSE LQRQKQLLEL QLQESKAKIQ NLEKAQREKE VLELQLKESK ARIQNLENRQ EGVSTIFQQE RARRDVTEDG LRKKLREASD VIDGLRKQVD
701: TFKGKRIL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.