Factsheet for Os10t0181700-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 4
cytosol 2
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os12t0538300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G36290.1	Os12t0538300-01	AT5G11980.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG24418	Sorghum	cytosol	81.94	83.31
TraesCS1D01G040800.1	Wheat	cytosol	81.61	82.56
TraesCS1B01G051700.2	Wheat	cytosol	81.44	82.53
Zm00001d024625_P002	Maize	cytosol	79.8	82.37
TraesCS1A01G039200.1	Wheat	cytosol	73.56	81.75
HORVU7Hr1G083280.20	Barley	cytosol	80.95	81.35
TraesCS7B01G249900.1	Wheat	cytosol	81.12	80.19
TraesCS7D01G345800.1	Wheat	cytosol	80.79	79.87
TraesCS7A01G338600.1	Wheat	cytosol, plastid	80.62	79.71
HORVU1Hr1G006770.6	Barley	cytosol	81.94	79.46
GSMUA_Achr4P18400_001	Banana	cytosol	26.27	77.67
GSMUA_Achr4P18410_001	Banana	extracellular	22.82	76.37
PGSC0003DMT400009101	Potato	plastid	8.37	51.0
VIT_04s0023g02740.t01	Wine grape	cytosol	53.2	50.55
AT4G36280.1	Thale cress	cytosol	50.57	49.2
AT4G36290.1	Thale cress	cytosol	50.25	48.19
Solyc02g084700.2.1	Tomato	cytosol	50.57	47.83
KRH08132	Soybean	cytosol	49.43	47.78
AT4G36270.1	Thale cress	cytosol	38.1	47.74
KRH69835	Soybean	cytosol	49.1	45.37
CDY59688	Canola	golgi, plasma membrane, plastid	12.81	44.07
Os01t0549200-02	Rice	cytosol, peroxisome, plastid	22.99	38.57
Os11t0454800-01	Rice	cytosol	27.91	37.53
CDY59720	Canola	endoplasmic reticulum, extracellular	14.78	35.86
Os02t0469300-02	Rice	nucleus	39.41	29.89
Bra011676.1-P	Field mustard	cytosol	52.38	24.96
CDX75568	Canola	cytosol	51.89	23.46
CDX69218	Canola	cytosol	51.89	23.39
Os06t0622000-01	Rice	cytosol	18.72	14.39
Os04t0311100-01	Rice	cytosol, nucleus	1.48	14.29

Protein Annotations

MapMan:12.5.1.2	Gene3D:3.30.565.10	EntrezGene:4348210	ProteinID:ABB46960.2	ProteinID:BAF26167.1	ProteinID:BAT10127.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:IPR036890
EnsemblPlantsGene:Os10g0181700	EnsemblPlants:Os10t0181700-01	PFAM:PF13589	PANTHER:PTHR23336	PANTHER:PTHR23336:SF46	UniProt:Q33AG5
SUPFAM:SSF55874	UniParc:UPI0000DB3FDC	RefSeq:XP_015614816.1	SEG:seg	:	:

Description

ATP-binding region, ATPase-like domain containing protein. (Os10t0181700-01);Hypothetical conserved gene. (Os10t0181700-02)

Coordinates

chr10:-:5595755..5610443

Molecular Weight (calculated)

68008.0 Da

IEP (calculated)

7.672

GRAVY (calculated)

-0.447

Length

609 amino acids

Sequence
(BLAST)

001: MPAAMAGGTG GAGGGGGRAL DCRSFWKAGA FESASAPSRE FHDALVAGDF DRARVHPKFL HTNATSHKWA FGAIAELLDN AVDEICNGAT FIKVDKSVNL
101: KDNSTMLVFQ DDGGGMDPEG VRRCMSLGFS TKKSKKTIGQ YGNGFKTSTM RLGADAIVFT RANRGSNVTL SIGLLSYTFL RRTMKDDIVV PMLDFKIQDG
201: HIVPLVYGSQ GDWDSSLKII LEWSPFSSKE ELLQQFKDIV SHGTKVAIYN LWMNDDGLLE LDFEDDDEDI LLRDQDKASG GVTKAQKEIV QQHISHRLRF
301: SLRAYTSILY LKKFENFQII LRGKPVEQIR IADELKFKKL VTYKPQVAHD SQVVSVKVDV GFAKEAPVLG IFGMNVYHKN RLIMPFWKVL QEGSSRGRSV
401: VGVLEANFIE PAHDKQDFER TPLFIRLEAK LRQIILDYWK EKCHLIGYQP VDPQLRSQYK AALKDSGNPG PKSQQKASTS RRTGGHTSNL LPETYDDTEV
501: IGLTANGSGS RVRSFGQAQE NSMEPVGLDE NSVDIGSEGA LDPYIMEKLS EENIGLFTRR EELRQRDTQL RQTVGELEQQ LAETKKKCAQ LADDLRIRKS
601: QQQQQPPYI

Best Arabidopsis Sequence Match ( AT4G36290.1 )
(BLAST)

001: MAKNYTVADV VNIDSDSDSD DDNGGVIGMV PSLASLIENQ KVSIADAATV APRETLECRS FWKAGENFVI PSSVTLTAIG MVEHARVHPK FLHSNATSHK
101: WAFGAIAELL DNAVDEIQNG ATVVKIDKIN IVKDNTPALV FQDNGGGMDP NGIRKCMSLG YSSKKSNTTI GQYGNGFKTS TMRLGADAMV FSRSTRGGKS
201: TQSIGLLSYT FLRKTGQDDV IVPMIDFDIS SDSPQPIIYG SPGDWSTNLN ILLKWSPFST MVELLQQFED IGTHGTKVII YNLWLNDEGI YELSFDDDDV
301: DIRLRDENAQ DGKRLHAKTL EVRSHISYRY RHSLRAYISM LYLKKFKNFK IILRGVSVAQ FNIADEFRHP ETIMYKPQAA AVDYAATGIK VGFIKEAPKL
401: PICGFNVYHK NRLIRPFWKV VLEGSTRGNG VMGVLEANFI EPAHDKQDFE RSSLFLRLEA RLKRITSDYW QNHCHIFGYQ TAQIPADKSK RTVIPDQPPT
501: VNTYNPSPLP SDRISHGGPI IREINLSNAT SSRTAAVAAP HLRNYTGLRN NFQPVQLNPQ PPAAGDTGNN LVGKLAAEIR EENLQLFMRC EEYVKKENEV
601: EQTVKSLEKE LEEIKSKCAQ LALLVDAKKK EMQQV

Arabidopsis Description

MORC1Protein MICRORCHIDIA 1 [Source:UniProtKB/Swiss-Prot;Acc:Q84WV6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.