Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY59688 | Canola | golgi, plasma membrane, plastid | 27.09 | 38.42 |
| GSMUA_Achr4P18400_001 | Banana | cytosol | 19.92 | 24.27 |
| AT4G36280.1 | Thale cress | cytosol | 45.42 | 18.21 |
| AT4G36270.1 | Thale cress | cytosol | 32.67 | 16.87 |
| VIT_04s0023g02740.t01 | Wine grape | cytosol | 41.04 | 16.07 |
| KRH08132 | Soybean | cytosol | 39.44 | 15.71 |
| Solyc02g084700.2.1 | Tomato | cytosol | 40.24 | 15.68 |
| Zm00001d024625_P002 | Maize | cytosol | 35.86 | 15.25 |
| KRH69835 | Soybean | cytosol | 39.84 | 15.17 |
| CDX71661 | Canola | cytosol | 9.96 | 15.15 |
| TraesCS1D01G040800.1 | Wheat | cytosol | 36.26 | 15.12 |
| KXG24418 | Sorghum | cytosol | 35.86 | 15.03 |
| TraesCS1B01G051700.2 | Wheat | cytosol | 35.86 | 14.97 |
| Os10t0181700-01 | Rice | cytosol, plastid | 35.86 | 14.78 |
| HORVU7Hr1G083280.20 | Barley | cytosol | 35.46 | 14.69 |
| HORVU1Hr1G006770.6 | Barley | cytosol | 36.65 | 14.65 |
| TraesCS7A01G338600.1 | Wheat | cytosol, plastid | 35.46 | 14.45 |
| TraesCS7B01G249900.1 | Wheat | cytosol | 35.46 | 14.45 |
| TraesCS1A01G039200.1 | Wheat | cytosol | 31.47 | 14.42 |
| TraesCS7D01G345800.1 | Wheat | cytosol | 35.06 | 14.29 |
| PGSC0003DMT400009101 | Potato | plastid | 5.18 | 13.0 |
| CDX81913 | Canola | nucleus | 18.33 | 12.27 |
| GSMUA_Achr4P18410_001 | Banana | extracellular | 8.76 | 12.09 |
| CDY41018 | Canola | nucleus | 31.08 | 11.47 |
| CDY52039 | Canola | plastid | 30.68 | 11.21 |
| CDX84021 | Canola | plastid | 30.68 | 11.16 |
| CDY21683 | Canola | nucleus | 27.89 | 10.87 |
| CDY03400 | Canola | nucleus | 29.08 | 10.85 |
| CDX92664 | Canola | nucleus | 29.48 | 10.69 |
| CDY34330 | Canola | nucleus | 28.69 | 10.65 |
| CDY11045 | Canola | nucleus | 29.48 | 10.62 |
| CDX81912 | Canola | nucleus | 10.36 | 10.36 |
| CDX84876 | Canola | nucleus | 29.48 | 9.76 |
| CDX97228 | Canola | nucleus, plastid | 31.87 | 9.64 |
| CDX69668 | Canola | nucleus, plastid | 31.87 | 9.62 |
| CDY45818 | Canola | nucleus | 29.48 | 9.55 |
| CDX69218 | Canola | cytosol | 45.02 | 8.36 |
| CDX75568 | Canola | cytosol | 44.62 | 8.31 |
Protein Annotations
| EnsemblPlants:CDY59720 | EnsemblPlantsGene:GSBRNA2T00027627001 | GO:A0A078J814 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR23336 | PANTHER:PTHR23336:SF18 | ProteinID:CDY59720 | ProteinID:CDY59720.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004EEBFA7 | UniProt:A0A078J814 | MapMan:12.5.1.2 | : | : | : |
Description
BnaA03g59190DBnaA03g59190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J814]
Coordinates
chrLK033799:-:19183..21021
Molecular Weight (calculated)
29569.5 Da
IEP (calculated)
9.641
GRAVY (calculated)
-0.471
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MQLTRYACIK GTAYLLLIVT ELYVTAFAFV HLYSQLTSFS FPRRRRQDGS RWDQKMHQRS LIRQLDNSGC YKEFHLLPKL HRALVFCLTR SLGKRARMIL
101: IFDISKDGPQ PIIYESSEDW FTNLNILLKW SQFEDIGAHG TKVIIYNLWL NDEGIYELSF DDDDEDKRLR DESVQDEKRI NSRTLDLRSH ISYRVRHSLR
201: AYTSMLYLKM FGNFKIIYSS GNLCGAVRGI YKERDWHGTD GKELRKGTGR S
101: IFDISKDGPQ PIIYESSEDW FTNLNILLKW SQFEDIGAHG TKVIIYNLWL NDEGIYELSF DDDDEDKRLR DESVQDEKRI NSRTLDLRSH ISYRVRHSLR
201: AYTSMLYLKM FGNFKIIYSS GNLCGAVRGI YKERDWHGTD GKELRKGTGR S
001: MPPMAKNAAV TDVVHLDSDS DSDNGVVGGR ESASTIAGAA TMAPRETLEC RSFWKAGDYF VIPNVVTPTA PGMLEHARVH PRFLHSNATS HKWAFGAIAE
101: LLDNAVDEIQ NGATFVKIDK INIVKDNSPA LVFQDDGGGM DPAGLRKCMS LGYSSKKSNT TIGQYGNGFK TSTMRLGADA IVFSRSTRGG TSTQSVGILS
201: YTFLRKTGQD DVTVPMIDID ISKERPQPII YGSPEDWAAN LEILLKWSPF STEDELLQQF EDVGTHGTKV IIYNLWLNDE GIYELSFDDD EEDIRLRDES
301: VNDGKRLHHK ILELRSHISY HLRYSLRAYA SMLYLKKFKN FKIIIRGIPV EQFNIADGFR FPEIIKYKPH TATTEQASTE IKIGFVKEAP KLAICGFNVY
401: HKNRLIRPFW KVTMGGDSTG HGVVGVLEAN FIEPAHDKQD FERSSLFQRL EARLKKIVYS YWYSHCHLLG YHKYQMPADK SKKIAIPDQP PTISTVNPSP
501: LPSDKISQGG PIIREINLSN ATSSRTVAFA SPHLRNSTGL RSNFQPVQLN PQPTAADTGN NLDGKSAGEI RQENLQLFMR CEEYIKKENE TEQTVKSLEK
601: ELEEFKSKCA HLALLVDAKK KEMQQA
101: LLDNAVDEIQ NGATFVKIDK INIVKDNSPA LVFQDDGGGM DPAGLRKCMS LGYSSKKSNT TIGQYGNGFK TSTMRLGADA IVFSRSTRGG TSTQSVGILS
201: YTFLRKTGQD DVTVPMIDID ISKERPQPII YGSPEDWAAN LEILLKWSPF STEDELLQQF EDVGTHGTKV IIYNLWLNDE GIYELSFDDD EEDIRLRDES
301: VNDGKRLHHK ILELRSHISY HLRYSLRAYA SMLYLKKFKN FKIIIRGIPV EQFNIADGFR FPEIIKYKPH TATTEQASTE IKIGFVKEAP KLAICGFNVY
401: HKNRLIRPFW KVTMGGDSTG HGVVGVLEAN FIEPAHDKQD FERSSLFQRL EARLKKIVYS YWYSHCHLLG YHKYQMPADK SKKIAIPDQP PTISTVNPSP
501: LPSDKISQGG PIIREINLSN ATSSRTVAFA SPHLRNSTGL RSNFQPVQLN PQPTAADTGN NLDGKSAGEI RQENLQLFMR CEEYIKKENE TEQTVKSLEK
601: ELEEFKSKCA HLALLVDAKK KEMQQA
Arabidopsis Description
MORC2Protein MICRORCHIDIA 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5FV35]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.