Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0147g00080.t01 | Wine grape | cytosol | 39.39 | 16.13 |
| Zm00001d053268_P001 | Maize | cytosol | 47.27 | 14.83 |
| CDY03400 | Canola | nucleus | 60.0 | 14.71 |
| CDY34330 | Canola | nucleus | 59.39 | 14.5 |
| CDX92664 | Canola | nucleus | 59.39 | 14.16 |
| CDY11045 | Canola | nucleus | 59.39 | 14.06 |
| CDX84021 | Canola | plastid | 58.18 | 13.91 |
| CDY52039 | Canola | plastid | 56.97 | 13.68 |
| CDX81913 | Canola | nucleus | 29.7 | 13.07 |
| CDX84876 | Canola | nucleus | 58.79 | 12.8 |
| CDY45818 | Canola | nucleus | 58.79 | 12.52 |
| GSMUA_Achr11P... | Banana | nucleus | 60.61 | 12.09 |
| EES10563 | Sorghum | nucleus | 57.58 | 12.06 |
| Zm00001d004118_P003 | Maize | nucleus | 57.58 | 11.9 |
| AT5G50780.1 | Thale cress | nucleus | 58.79 | 11.84 |
| VIT_17s0000g00910.t01 | Wine grape | nucleus | 59.39 | 11.81 |
| CDX97228 | Canola | nucleus, plastid | 57.58 | 11.45 |
| CDX69668 | Canola | nucleus, plastid | 57.58 | 11.42 |
| TraesCS2B01G291200.1 | Wheat | nucleus | 54.55 | 11.41 |
| Solyc03g097520.2.1 | Tomato | nucleus | 57.58 | 11.39 |
| TraesCS2A01G273000.2 | Wheat | nucleus | 55.15 | 11.28 |
| HORVU2Hr1G066650.2 | Barley | cytosol | 53.94 | 11.07 |
| KRH59787 | Soybean | nucleus | 55.15 | 11.02 |
| KRH41106 | Soybean | nucleus | 54.55 | 10.98 |
| TraesCS2D01G272300.3 | Wheat | nucleus | 55.15 | 10.73 |
| KXG30181 | Sorghum | nucleus | 50.91 | 10.43 |
| Os02t0469300-02 | Rice | nucleus | 49.7 | 10.21 |
| CDY59720 | Canola | endoplasmic reticulum, extracellular | 15.15 | 9.96 |
| CDY21683 | Canola | nucleus | 30.91 | 7.92 |
| CDY41018 | Canola | nucleus | 28.48 | 6.91 |
| CDY59688 | Canola | golgi, plasma membrane, plastid | 4.85 | 4.52 |
| CDX75568 | Canola | cytosol | 29.09 | 3.56 |
| CDX69218 | Canola | cytosol | 29.09 | 3.55 |
| CDX81912 | Canola | nucleus | 3.03 | 1.99 |
| Zm00001d053269_P001 | Maize | cytosol | 1.21 | 0.77 |
Protein Annotations
| EnsemblPlants:CDX71661 | EnsemblPlantsGene:GSBRNA2T00152296001 | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF7 | ProteinID:CDX71661 | ProteinID:CDX71661.1 |
| UniParc:UPI0004EAFA00 | MapMan:12.5.1.2 | : | : | : | : |
Description
BnaC09g27020D
Coordinates
chrLK031794:-:2440233..2441677
Molecular Weight (calculated)
19065.7 Da
IEP (calculated)
9.915
GRAVY (calculated)
-0.635
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MKVHGTRIVI YNLREDDQGL LELDFDTDPH DIQLRGVNRD EKKINMATQF PNSRPFVTYK HSLRMSAVVT IGFVKVAKHH IDVQGFNVYH KNRLIKISLT
101: KLYPTYYVTY FGSDGRGVIA PHRDDHFCTS SNSPEKERRA EYFDKYSVRK ALGAPKSITN NHHTA
101: KLYPTYYVTY FGSDGRGVIA PHRDDHFCTS SNSPEKERRA EYFDKYSVRK ALGAPKSITN NHHTA
001: MDNSIHVKRE IQLPSTSPAG FPGRESVTVV DLCSSDDDSD IGEVAGGLEK VGNNFVGLKR GRDTFGGSSE VDRNNVKKVT TLAELGVGLP EGFGQSNPPE
101: SLTHPIPANP CNVFRPVPPP PPPPYAGTSG KIGGCKQFWK AGDYEGAAGD NWDLSSGGFD HVRVHPKFLH SNATSHKWAL GAFAELLDNA LDEVASGATY
201: VKVDMLENNK GGNRMLLIED NGGGMDPEKM RQCMSLGYSA KSKLANTIGQ YGNGFKTSTM RLGADVIVFS RCPGKDGKSS TQSIGLLSYT FLRSTGKEDI
301: VVPMLDYERR DPEWSKIIRS STRDWDKNVE TIIQWSPFSS EEDLLHQFDL MKDRGTRIII YNLWEDDQGM LELDFDADPY DIQLRGVNRE ERNIKMASQF
401: PNSRHFLTYK HSLRSYVSIL YLRIPPGFRI ILRGIDVEHH SVVNDMMQTE QITYRPQSES YGVVTNMSAI VIIGFVKDAK HHVDVQGFNV YHKNRLIKPF
501: WRIWNATGSD GRGVIGVLEA NFVEPAHDKQ GFERTTVLAR LESRLVQMQK TYWSTNCHKI GYAPRRREKS AYGYDNRDSS PENDREGPSS IKTPTPASDK
601: FYSSSYPNHN GDNGVSGKDG ARLQEELRRE KERRKALEVE VQLSRQKIEE MKKEQENLIE IFSEERDRRD GEEEVLRNKL EEASNTIDDL LNKIKKMEGS
701: KVPSWRH
101: SLTHPIPANP CNVFRPVPPP PPPPYAGTSG KIGGCKQFWK AGDYEGAAGD NWDLSSGGFD HVRVHPKFLH SNATSHKWAL GAFAELLDNA LDEVASGATY
201: VKVDMLENNK GGNRMLLIED NGGGMDPEKM RQCMSLGYSA KSKLANTIGQ YGNGFKTSTM RLGADVIVFS RCPGKDGKSS TQSIGLLSYT FLRSTGKEDI
301: VVPMLDYERR DPEWSKIIRS STRDWDKNVE TIIQWSPFSS EEDLLHQFDL MKDRGTRIII YNLWEDDQGM LELDFDADPY DIQLRGVNRE ERNIKMASQF
401: PNSRHFLTYK HSLRSYVSIL YLRIPPGFRI ILRGIDVEHH SVVNDMMQTE QITYRPQSES YGVVTNMSAI VIIGFVKDAK HHVDVQGFNV YHKNRLIKPF
501: WRIWNATGSD GRGVIGVLEA NFVEPAHDKQ GFERTTVLAR LESRLVQMQK TYWSTNCHKI GYAPRRREKS AYGYDNRDSS PENDREGPSS IKTPTPASDK
601: FYSSSYPNHN GDNGVSGKDG ARLQEELRRE KERRKALEVE VQLSRQKIEE MKKEQENLIE IFSEERDRRD GEEEVLRNKL EEASNTIDDL LNKIKKMEGS
701: KVPSWRH
Arabidopsis Description
MORC7Protein MICRORCHIDIA 7 [Source:UniProtKB/Swiss-Prot;Acc:F4JRS4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.