Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY03400 | Canola | nucleus | 96.15 | 96.58 |
| Bra013851.1-P | Field mustard | nucleus | 99.11 | 96.4 |
| CDY11045 | Canola | nucleus | 85.8 | 83.21 |
| CDX92664 | Canola | nucleus | 85.06 | 83.09 |
| AT4G24970.1 | Thale cress | nucleus | 80.47 | 76.94 |
| CDX84876 | Canola | nucleus | 67.16 | 59.89 |
| CDX71661 | Canola | cytosol | 14.5 | 59.39 |
| CDY45818 | Canola | nucleus | 67.01 | 58.45 |
| VIT_17s0000g00910.t01 | Wine grape | nucleus | 67.6 | 55.06 |
| KRH41106 | Soybean | nucleus | 65.09 | 53.66 |
| KRH59787 | Soybean | nucleus | 65.38 | 53.51 |
| Solyc03g097520.2.1 | Tomato | nucleus | 64.5 | 52.28 |
| EES10563 | Sorghum | nucleus | 57.1 | 48.98 |
| GSMUA_Achr11P... | Banana | nucleus | 59.62 | 48.73 |
| Zm00001d004118_P003 | Maize | nucleus | 57.1 | 48.37 |
| TraesCS2B01G291200.1 | Wheat | nucleus | 56.36 | 48.29 |
| Zm00001d053269_P001 | Maize | cytosol | 18.49 | 47.89 |
| TraesCS2A01G273000.2 | Wheat | nucleus | 55.03 | 46.1 |
| HORVU2Hr1G066650.2 | Barley | cytosol | 53.99 | 45.4 |
| CDY52039 | Canola | plastid | 45.71 | 44.98 |
| CDX84021 | Canola | plastid | 45.56 | 44.64 |
| CDX81912 | Canola | nucleus | 16.57 | 44.62 |
| TraesCS2D01G272300.3 | Wheat | nucleus | 55.18 | 43.99 |
| KXG30181 | Sorghum | nucleus | 51.63 | 43.35 |
| Os02t0469300-02 | Rice | nucleus | 50.59 | 42.59 |
| CDX69668 | Canola | nucleus, plastid | 47.78 | 38.82 |
| CDX97228 | Canola | nucleus, plastid | 47.49 | 38.67 |
| VIT_13s0147g00080.t01 | Wine grape | cytosol | 22.04 | 36.97 |
| CDY21683 | Canola | nucleus | 33.14 | 34.78 |
| CDY59688 | Canola | golgi, plasma membrane, plastid | 8.88 | 33.9 |
| CDY41018 | Canola | nucleus | 33.28 | 33.09 |
| Zm00001d053268_P001 | Maize | cytosol | 25.3 | 32.51 |
| CDX81913 | Canola | nucleus | 17.01 | 30.67 |
| CDY59720 | Canola | endoplasmic reticulum, extracellular | 10.65 | 28.69 |
| CDX75568 | Canola | cytosol | 33.28 | 16.7 |
| CDX69218 | Canola | cytosol | 32.99 | 16.51 |
Protein Annotations
| EnsemblPlants:CDY34330 | EnsemblPlantsGene:GSBRNA2T00056369001 | Gene3D:3.30.565.10 | InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:IPR036890 |
| ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF7 | PFAM:PF13589 | ProteinID:CDY34330 | ProteinID:CDY34330.1 |
| SEG:seg | SUPFAM:SSF55874 | UniParc:UPI0004EEE775 | UniProt:A0A078H6Y6 | MapMan:12.5.1.2 | : |
Description
BnaA01g14330DBnaA01g14330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H6Y6]
Coordinates
chrLK032332:+:322584..326960
Molecular Weight (calculated)
76597.8 Da
IEP (calculated)
6.441
GRAVY (calculated)
-0.749
Length
676 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNDAKQENL QTSTPPPAGF PVEETVTLID LCSGDDSDLV EQDVQRRYNS GGAKRPRGSS ASDMNNAKKP TADELKFVLP EGFGQPIPPP PHASSGRVGS
101: CKQFWKAGDY EGAPGGNWDL SSGGFDHVRV HPKFLHSNAT SHKWALGAFA ELLDNALDEV ASGATYVNVD MLENKKEGNR MLLIEDNGGG MDPEKMRQCM
201: SLGYSAKSKL ANTIGQYGNG FKTSTMRLGA DVIVFSRCLG KDGKSSTQSI GLLSYTFLRS TGKEDIVVPM LDYERRDTEW SKVVRSSLSD WDKNVKTIIQ
301: WSPFSSEEDL LRQFALMNEH GTRIIIYNLW EDDQGMLELD FDADPHDIQL RGVNRDEKNI KMGAQFPNSR HFLTYKHSLR SYASILYLRI PPSFRIILRG
401: RDVEHHNVVN DMMQTEQITY RPQYGADSYV KDSNMSAVVV LGFVKDAKHH VDVQGFNVYH KNRLIKPFWR IWNATGSDGR GVIGVLEANF VEPAHDKQGF
501: ERTTVLSRLE TRLIQMQKIY WNTNCHKIGY APRRHPKAGN DYGHTNTSPE NDHEEYSPSG FKTRASDKFY SSSYPNHRGD NGVSGNDSSL YLQEELRRER
601: ERSKALEAEV ELARQKIEEM SKEQENLISI FTEERDRRDV EEESLRNKLE EASNTIEELL NKIKMLEGSK GPSWRR
101: CKQFWKAGDY EGAPGGNWDL SSGGFDHVRV HPKFLHSNAT SHKWALGAFA ELLDNALDEV ASGATYVNVD MLENKKEGNR MLLIEDNGGG MDPEKMRQCM
201: SLGYSAKSKL ANTIGQYGNG FKTSTMRLGA DVIVFSRCLG KDGKSSTQSI GLLSYTFLRS TGKEDIVVPM LDYERRDTEW SKVVRSSLSD WDKNVKTIIQ
301: WSPFSSEEDL LRQFALMNEH GTRIIIYNLW EDDQGMLELD FDADPHDIQL RGVNRDEKNI KMGAQFPNSR HFLTYKHSLR SYASILYLRI PPSFRIILRG
401: RDVEHHNVVN DMMQTEQITY RPQYGADSYV KDSNMSAVVV LGFVKDAKHH VDVQGFNVYH KNRLIKPFWR IWNATGSDGR GVIGVLEANF VEPAHDKQGF
501: ERTTVLSRLE TRLIQMQKIY WNTNCHKIGY APRRHPKAGN DYGHTNTSPE NDHEEYSPSG FKTRASDKFY SSSYPNHRGD NGVSGNDSSL YLQEELRRER
601: ERSKALEAEV ELARQKIEEM SKEQENLISI FTEERDRRDV EEESLRNKLE EASNTIEELL NKIKMLEGSK GPSWRR
001: MDNSIHVKRE IQLPSTSPAG FPGRESVTVV DLCSSDDDSD IGEVAGGLEK VGNNFVGLKR GRDTFGGSSE VDRNNVKKVT TLAELGVGLP EGFGQSNPPE
101: SLTHPIPANP CNVFRPVPPP PPPPYAGTSG KIGGCKQFWK AGDYEGAAGD NWDLSSGGFD HVRVHPKFLH SNATSHKWAL GAFAELLDNA LDEVASGATY
201: VKVDMLENNK GGNRMLLIED NGGGMDPEKM RQCMSLGYSA KSKLANTIGQ YGNGFKTSTM RLGADVIVFS RCPGKDGKSS TQSIGLLSYT FLRSTGKEDI
301: VVPMLDYERR DPEWSKIIRS STRDWDKNVE TIIQWSPFSS EEDLLHQFDL MKDRGTRIII YNLWEDDQGM LELDFDADPY DIQLRGVNRE ERNIKMASQF
401: PNSRHFLTYK HSLRSYVSIL YLRIPPGFRI ILRGIDVEHH SVVNDMMQTE QITYRPQSES YGVVTNMSAI VIIGFVKDAK HHVDVQGFNV YHKNRLIKPF
501: WRIWNATGSD GRGVIGVLEA NFVEPAHDKQ GFERTTVLAR LESRLVQMQK TYWSTNCHKI GYAPRRREKS AYGYDNRDSS PENDREGPSS IKTPTPASDK
601: FYSSSYPNHN GDNGVSGKDG ARLQEELRRE KERRKALEVE VQLSRQKIEE MKKEQENLIE IFSEERDRRD GEEEVLRNKL EEASNTIDDL LNKIKKMEGS
701: KVPSWRH
101: SLTHPIPANP CNVFRPVPPP PPPPYAGTSG KIGGCKQFWK AGDYEGAAGD NWDLSSGGFD HVRVHPKFLH SNATSHKWAL GAFAELLDNA LDEVASGATY
201: VKVDMLENNK GGNRMLLIED NGGGMDPEKM RQCMSLGYSA KSKLANTIGQ YGNGFKTSTM RLGADVIVFS RCPGKDGKSS TQSIGLLSYT FLRSTGKEDI
301: VVPMLDYERR DPEWSKIIRS STRDWDKNVE TIIQWSPFSS EEDLLHQFDL MKDRGTRIII YNLWEDDQGM LELDFDADPY DIQLRGVNRE ERNIKMASQF
401: PNSRHFLTYK HSLRSYVSIL YLRIPPGFRI ILRGIDVEHH SVVNDMMQTE QITYRPQSES YGVVTNMSAI VIIGFVKDAK HHVDVQGFNV YHKNRLIKPF
501: WRIWNATGSD GRGVIGVLEA NFVEPAHDKQ GFERTTVLAR LESRLVQMQK TYWSTNCHKI GYAPRRREKS AYGYDNRDSS PENDREGPSS IKTPTPASDK
601: FYSSSYPNHN GDNGVSGKDG ARLQEELRRE KERRKALEVE VQLSRQKIEE MKKEQENLIE IFSEERDRRD GEEEVLRNKL EEASNTIDDL LNKIKKMEGS
701: KVPSWRH
Arabidopsis Description
MORC7Protein MICRORCHIDIA 7 [Source:UniProtKB/Swiss-Prot;Acc:F4JRS4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.