Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- vacuole 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34330 | Canola | nucleus | 55.06 | 67.6 |
| CDY03400 | Canola | nucleus | 54.58 | 67.31 |
| Bra013851.1-P | Field mustard | nucleus | 55.06 | 65.76 |
| CDY11045 | Canola | nucleus | 55.18 | 65.71 |
| Bra019199.1-P | Field mustard | cytosol | 55.06 | 65.66 |
| CDX92664 | Canola | nucleus | 54.58 | 65.46 |
| AT4G24970.1 | Thale cress | nucleus | 53.37 | 62.66 |
| KRH41106 | Soybean | nucleus | 61.33 | 62.07 |
| KRH59787 | Soybean | nucleus | 61.57 | 61.86 |
| Solyc03g097520.2.1 | Tomato | nucleus | 61.93 | 61.63 |
| CDX84876 | Canola | nucleus | 54.46 | 59.63 |
| Bra022762.1-P | Field mustard | nucleus | 54.34 | 59.42 |
| CDX71661 | Canola | cytosol | 11.81 | 59.39 |
| CDY45818 | Canola | nucleus | 54.22 | 58.06 |
| GSMUA_Achr11P... | Banana | nucleus | 54.7 | 54.9 |
| AT5G50780.1 | Thale cress | nucleus | 53.98 | 54.7 |
| TraesCS2B01G291200.1 | Wheat | nucleus | 51.45 | 54.12 |
| EES10563 | Sorghum | nucleus | 49.52 | 52.16 |
| TraesCS2A01G273000.2 | Wheat | nucleus | 50.6 | 52.04 |
| Zm00001d004118_P003 | Maize | nucleus | 49.88 | 51.88 |
| HORVU2Hr1G066650.2 | Barley | cytosol | 49.28 | 50.87 |
| TraesCS2D01G272300.3 | Wheat | nucleus | 50.6 | 49.53 |
| Zm00001d053269_P001 | Maize | cytosol | 15.18 | 48.28 |
| Os02t0469300-02 | Rice | nucleus | 45.9 | 47.45 |
| VIT_13s0147g00080.t01 | Wine grape | cytosol | 23.01 | 47.39 |
| KXG30181 | Sorghum | nucleus | 45.42 | 46.83 |
| VIT_14s0066g00870.t01 | Wine grape | nucleus | 32.29 | 42.54 |
| VIT_04s0023g02740.t01 | Wine grape | cytosol | 30.96 | 40.09 |
| Zm00001d053268_P001 | Maize | cytosol | 23.37 | 36.88 |
| VIT_17s0000g08750.t01 | Wine grape | nucleus | 31.33 | 36.67 |
| VIT_04s0044g01710.t01 | Wine grape | plastid | 13.13 | 18.44 |
Protein Annotations
| ArrayExpress:VIT_17s0000g00910 | EMBL:FN594950 | EnsemblPlants:VIT_17s0000g00910.t01 | EnsemblPlantsGene:VIT_17s0000g00910 | EntrezGene:100266246 | Gene3D:3.30.565.10 |
| InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:IPR036890 | ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF7 |
| PFAM:PF13589 | ProteinID:CBI15707 | ProteinID:CBI15707.3 | RefSeq:XP_010663774.1 | SEG:seg | SUPFAM:SSF55874 |
| UniParc:UPI0001BE0F2B | UniProt:D7SH27 | MapMan:12.5.1.2 | : | : | : |
Description
No Description!
Coordinates
chr17:-:604779..637111
Molecular Weight (calculated)
93471.1 Da
IEP (calculated)
7.138
GRAVY (calculated)
-0.781
Length
830 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDARVKQEI VEFAQALQPN RNDDVSKSVP LIELSSSDSS DSSDSSDSDD DDATVSGRKR FRVSSGLEGV LSKKKKLDGL GIVLPLGFLD PLPPEEPPAL
101: VPKAVTSPTA VAQRSSTANR NLVEQSCKLF WKAGEYEGAP GGDFDSSAGG LDHVRVHPKF LHSNATSHKW ALGAFAELLD NSLDEICNGA TYVNVDMLEN
201: KKDGNRMLLI EDNGGGMDPE KMRQCMSLGY SAKSKIANTI GQYGNGFKTS TMRLGADVIV FSRCCGKDGK SPTQSIGLLS YTFLRSTGKE DIVVPMIDYE
301: KGGREWNKMI RSSASDWNKN VETIMQWSPF SSELDLLRQF NFIKEHGTRI IIYNLWEDDP GQLELDFDTD PKDIQIRGVN RDEKNIQMAK QFPNSRHFLT
401: YRHSLRSYAS ILYLRLPPGF RIILRGKDVE HHNVVNDMMM TQEVTYRPQP SADGVPKDLN MVAVVTIGFV KDAKHHIDVQ GFNVYHKNRL IKPFWRLWNA
501: AGSDGRGVIG VLEANFVEPA HDKQGFERTI VLSRLETRLL QMQKTYWTTY CHKIGYAPRR NKKLINESAR ETSPDYLPQT PSQPKKKVGA SSGKTPLSNL
601: DKHASHSNHK QGGRELERTP ETVYQSHGNG HASSKQEKRT HMPTRPRKEQ SSLVPSSPSA EDVDDDDVPA VLPEREANGR VHKASHANNS FGEDGHQIST
701: RSQSKGDDVN GNSNSLALEQ LREENCELKE RLKRKEGDTV VALRGDLEKE REKCKLLETE LQEARQKIED MNKEQDSLID IFSEERDRRD IEEENLRKKL
801: REASNTIQEL LERVRVLEKM KTPNGKSERR
101: VPKAVTSPTA VAQRSSTANR NLVEQSCKLF WKAGEYEGAP GGDFDSSAGG LDHVRVHPKF LHSNATSHKW ALGAFAELLD NSLDEICNGA TYVNVDMLEN
201: KKDGNRMLLI EDNGGGMDPE KMRQCMSLGY SAKSKIANTI GQYGNGFKTS TMRLGADVIV FSRCCGKDGK SPTQSIGLLS YTFLRSTGKE DIVVPMIDYE
301: KGGREWNKMI RSSASDWNKN VETIMQWSPF SSELDLLRQF NFIKEHGTRI IIYNLWEDDP GQLELDFDTD PKDIQIRGVN RDEKNIQMAK QFPNSRHFLT
401: YRHSLRSYAS ILYLRLPPGF RIILRGKDVE HHNVVNDMMM TQEVTYRPQP SADGVPKDLN MVAVVTIGFV KDAKHHIDVQ GFNVYHKNRL IKPFWRLWNA
501: AGSDGRGVIG VLEANFVEPA HDKQGFERTI VLSRLETRLL QMQKTYWTTY CHKIGYAPRR NKKLINESAR ETSPDYLPQT PSQPKKKVGA SSGKTPLSNL
601: DKHASHSNHK QGGRELERTP ETVYQSHGNG HASSKQEKRT HMPTRPRKEQ SSLVPSSPSA EDVDDDDVPA VLPEREANGR VHKASHANNS FGEDGHQIST
701: RSQSKGDDVN GNSNSLALEQ LREENCELKE RLKRKEGDTV VALRGDLEKE REKCKLLETE LQEARQKIED MNKEQDSLID IFSEERDRRD IEEENLRKKL
801: REASNTIQEL LERVRVLEKM KTPNGKSERR
001: MEPIVKQENP VTTSTLSTWK PAARNKTIPP PESVIELSSS NEGSELGENL DEIAEIQSVD RTGGDDVSGT KRARSDSIAS PAKRLAVMIP DDDEEFLLST
101: TSGQAILALP ATPCNVVAAP SSWGSCKQFW KAGDYEGTSG GDWEVSAGGF DHVRVHPKFL HSNATSHKWS LGAFAELLDN ALDEVRSGAT FVNVDMIQNR
201: KDGSKMILIE DNGGGMNPEK MRHCMSLGYS AKSKLADTIG QYGNGFKTST MRLGADVIVF SRCLGKDGKS STQSIGLLSY TFLKSTGKED IVVPMLDYER
301: RDSEWCPITR SSVSDWEKNV ETVVQWSPYA TEEELLCQFN LMKKHGTRII IYNLWEDDEG MLELDFDTDP HDIQLRGVNR DDKNIVMASQ FPNSRHYLTY
401: KHSLRSYASI LYLKISHEFR IILRGKDVEH HNIVNDMMQT EKITYRPKEA ADGCAKYSNL SAVVTIGFVK DAKHHVDVQG FNVYHKNRLI KPFWRIWNAA
501: GSDGRGVIGV LEANFVEPAH DKQGFERTTV LSRLEARLLH MQKDYWRSKC HKIGYAKRQG RKSAKDTEKD TEDRESSPEF DPKGSASSRK RTVPSSFKTP
601: TAAPRFNTPT AASEKFNPRS NVNGGGKGSV KVSKDIGYKS SEKGGKLGNS FSKSNKRAKP QGARAVEVTN SDDDYDCDSS PERNVTELPG KSSELPKPQS
701: GPRTLSQLEQ ENNELRERLD KKEEVFLLLQ KDLRRERELR KTLEAEVETL KNKLKEMDKE QASLIDVFAE DRDRRDKEEE NLRIKLEEAS NTIQKLIDGK
801: ARGR
101: TSGQAILALP ATPCNVVAAP SSWGSCKQFW KAGDYEGTSG GDWEVSAGGF DHVRVHPKFL HSNATSHKWS LGAFAELLDN ALDEVRSGAT FVNVDMIQNR
201: KDGSKMILIE DNGGGMNPEK MRHCMSLGYS AKSKLADTIG QYGNGFKTST MRLGADVIVF SRCLGKDGKS STQSIGLLSY TFLKSTGKED IVVPMLDYER
301: RDSEWCPITR SSVSDWEKNV ETVVQWSPYA TEEELLCQFN LMKKHGTRII IYNLWEDDEG MLELDFDTDP HDIQLRGVNR DDKNIVMASQ FPNSRHYLTY
401: KHSLRSYASI LYLKISHEFR IILRGKDVEH HNIVNDMMQT EKITYRPKEA ADGCAKYSNL SAVVTIGFVK DAKHHVDVQG FNVYHKNRLI KPFWRIWNAA
501: GSDGRGVIGV LEANFVEPAH DKQGFERTTV LSRLEARLLH MQKDYWRSKC HKIGYAKRQG RKSAKDTEKD TEDRESSPEF DPKGSASSRK RTVPSSFKTP
601: TAAPRFNTPT AASEKFNPRS NVNGGGKGSV KVSKDIGYKS SEKGGKLGNS FSKSNKRAKP QGARAVEVTN SDDDYDCDSS PERNVTELPG KSSELPKPQS
701: GPRTLSQLEQ ENNELRERLD KKEEVFLLLQ KDLRRERELR KTLEAEVETL KNKLKEMDKE QASLIDVFAE DRDRRDKEEE NLRIKLEEAS NTIQKLIDGK
801: ARGR
Arabidopsis Description
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein [Source:TAIR;Acc:AT5G50780]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.