Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G202400.1 | Wheat | cytosol | 98.31 | 98.31 |
| TraesCS3B01G231900.1 | Wheat | cytosol | 98.0 | 98.0 |
| HORVU3Hr1G046280.3 | Barley | cytosol | 95.22 | 95.22 |
| Os01t0549200-02 | Rice | cytosol, peroxisome, plastid | 44.84 | 80.17 |
| EES00907 | Sorghum | cytosol | 79.82 | 76.63 |
| Zm00001d044506_P006 | Maize | cytosol | 77.2 | 71.47 |
| GSMUA_Achr4P13250_001 | Banana | cytosol | 51.0 | 53.47 |
| CDX81912 | Canola | nucleus | 18.8 | 48.61 |
| VIT_14s0066g00870.t01 | Wine grape | nucleus | 43.76 | 45.08 |
| Solyc06g071580.2.1 | Tomato | cytosol | 40.37 | 43.59 |
| KRH03266 | Soybean | mitochondrion | 44.53 | 42.81 |
| Bra031063.1-P | Field mustard | nucleus | 43.76 | 42.64 |
| VIT_17s0000g08750.t01 | Wine grape | nucleus | 46.38 | 42.45 |
| CDY21683 | Canola | nucleus | 41.76 | 42.08 |
| TraesCS3A01G329400.1 | Wheat | plastid | 46.38 | 41.98 |
| KRH63565 | Soybean | cytosol | 44.22 | 41.72 |
| AT1G19100.1 | Thale cress | nucleus | 42.37 | 41.48 |
| CDY41018 | Canola | nucleus | 42.84 | 40.88 |
| Solyc01g099300.2.1 | Tomato | nucleus | 44.07 | 40.11 |
| TraesCS1A01G039200.1 | Wheat | cytosol | 33.28 | 39.42 |
| TraesCS7A01G338600.1 | Wheat | cytosol, plastid | 36.52 | 38.47 |
| CDX81913 | Canola | nucleus | 22.19 | 38.4 |
| TraesCS2A01G273000.2 | Wheat | nucleus | 38.21 | 30.73 |
| TraesCS7A01G235300.2 | Wheat | nucleus | 42.99 | 27.82 |
| TraesCS7A01G399000.1 | Wheat | cytosol | 19.72 | 16.86 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G192600.2 | EnsemblPlantsGene:TraesCS3A01G192600 | Gene3D:3.30.565.10 | InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:IPR036890 |
| ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF44 | PFAM:PF13589 | SEG:seg | SUPFAM:SSF55874 |
| TIGR:cd00075 | MapMan:12.5.1.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3A:+:256234408..256245222
Molecular Weight (calculated)
73201.1 Da
IEP (calculated)
7.786
GRAVY (calculated)
-0.474
Length
649 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSGGAAEVI DLSSDDDGES LPFPSTSAVT VAPSSTRDVK PYELADVKPL LYPIQPPGCF ALVPVKDEDP VPLPLAAKAP RVLPPPRLCR QFWKSGEYVV
101: ARRNPDADAP GGRNRLRINP KFLHSNATSH KWAFGAIAEL LDNAIDEVNN GATFVRVNKF TNPRDGSPSL LVQDDGGGMD PDALRCCMSF GFSDKQSDAF
201: IGQYGNGFKT STMRLGADVI VFTQNQKNWT PTRSIGLLSY TFLMETGCDD VLVPTVDYQY DLTTASYTQL LRHNQKLFSS NLAILSKWSP FASEAELLKQ
301: FDDIGEHGTK IIVFNLWFND DGDMELDFNS DKKDILITGA QKKVKTNKHE KLMTQDYIAN RLRYSLRAYA SILYLRVPDS FRIILRGQDV EPHNVVNDLL
401: YRECVLYKPQ IAGLPELSIV TTIGFVKGAP DTDVQGFNVY HKNRLITPFW KVASNSYGKG RGVVGILDAS FIKPTHDKQD FEKSVLHQRL ENRLKEMTYE
501: YWGLHCHRLG YDNKSLPKAS RALYRAKQTG AGSSPASVPH QLLTADIPTS SCVQSSMGQK RNFDALGVIS DINNHQTKHR NVIQRKRFHE YKTLTLENDK
601: LRDECLQYEE SEKQLVEKEQ KLRYQIAKET KKYEELLEEL KLLDVKLET
101: ARRNPDADAP GGRNRLRINP KFLHSNATSH KWAFGAIAEL LDNAIDEVNN GATFVRVNKF TNPRDGSPSL LVQDDGGGMD PDALRCCMSF GFSDKQSDAF
201: IGQYGNGFKT STMRLGADVI VFTQNQKNWT PTRSIGLLSY TFLMETGCDD VLVPTVDYQY DLTTASYTQL LRHNQKLFSS NLAILSKWSP FASEAELLKQ
301: FDDIGEHGTK IIVFNLWFND DGDMELDFNS DKKDILITGA QKKVKTNKHE KLMTQDYIAN RLRYSLRAYA SILYLRVPDS FRIILRGQDV EPHNVVNDLL
401: YRECVLYKPQ IAGLPELSIV TTIGFVKGAP DTDVQGFNVY HKNRLITPFW KVASNSYGKG RGVVGILDAS FIKPTHDKQD FEKSVLHQRL ENRLKEMTYE
501: YWGLHCHRLG YDNKSLPKAS RALYRAKQTG AGSSPASVPH QLLTADIPTS SCVQSSMGQK RNFDALGVIS DINNHQTKHR NVIQRKRFHE YKTLTLENDK
601: LRDECLQYEE SEKQLVEKEQ KLRYQIAKET KKYEELLEEL KLLDVKLET
001: MSHDRSVNVS HDAVIAKPER GTMLQSFSPR SHGSKGYSLP QDSEENRGSV GQSAGQSSTS VVDQVRSPAD DAGVTSSSTI CPAPVCRQFW KAGSYNDELS
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
Arabidopsis Description
MORC6Protein MICRORCHIDIA 6 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.