Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG33558 | Sorghum | cytosol | 84.55 | 84.67 |
| Zm00001d012575_P001 | Maize | mitochondrion, nucleus | 76.02 | 74.8 |
| Os11t0454800-01 | Rice | cytosol | 37.94 | 61.81 |
| TraesCS3A01G329400.1 | Wheat | plastid | 59.49 | 61.23 |
| TraesCS3D01G322900.1 | Wheat | plastid | 59.49 | 61.06 |
| TraesCS3B01G359600.1 | Wheat | cytosol | 58.13 | 60.94 |
| HORVU3Hr1G078330.4 | Barley | endoplasmic reticulum, plasma membrane | 59.49 | 55.01 |
| GSMUA_Achr9P25210_001 | Banana | cytosol | 38.62 | 54.49 |
| CDX81912 | Canola | nucleus | 16.12 | 47.41 |
| VIT_14s0066g00870.t01 | Wine grape | nucleus | 37.8 | 44.29 |
| Solyc06g071580.2.1 | Tomato | cytosol | 35.37 | 43.43 |
| AT1G19100.1 | Thale cress | nucleus | 38.48 | 42.84 |
| Zm00001d044506_P006 | Maize | cytosol | 40.65 | 42.8 |
| Bra031063.1-P | Field mustard | nucleus | 37.8 | 41.89 |
| CDY21683 | Canola | nucleus | 36.04 | 41.3 |
| Solyc01g099300.2.1 | Tomato | nucleus | 39.7 | 41.09 |
| VIT_17s0000g08750.t01 | Wine grape | nucleus | 39.16 | 40.76 |
| KRH63565 | Soybean | cytosol | 37.8 | 40.55 |
| KRH03266 | Soybean | mitochondrion | 36.72 | 40.15 |
| CDY41018 | Canola | nucleus | 36.45 | 39.56 |
| Zm00001d024625_P002 | Maize | cytosol | 31.17 | 38.98 |
| CDX81913 | Canola | nucleus | 19.65 | 38.67 |
| Zm00001d053269_P001 | Maize | cytosol | 11.11 | 31.42 |
| Zm00001d004118_P003 | Maize | nucleus | 31.57 | 29.2 |
| Zm00001d045978_P002 | Maize | cytosol | 36.04 | 27.23 |
| Zm00001d053268_P001 | Maize | cytosol | 16.53 | 23.19 |
| Zm00001d046722_P007 | Maize | cytosol | 17.07 | 15.04 |
Protein Annotations
| EnsemblPlants:Zm00001d043191_P005 | EnsemblPlants:Zm00001d043191_T005 | EnsemblPlantsGene:Zm00001d043191 | EntrezGene:103651104 | Gene3D:3.30.565.10 | InterPro:HATPase_C |
| InterPro:HATPase_C_sf | InterPro:IPR036890 | ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF45 | PFAM:PF13589 |
| ProteinID:ONM37184.1 | ProteinID:ONM37186.1 | SEG:seg | SUPFAM:SSF55874 | UniParc:UPI0004DEB5F5 | UniProt:A0A1D6N9G4 |
| MapMan:12.5.1.2 | : | : | : | : | : |
Description
Protein MICRORCHIDIA 6
Coordinates
chr3:+:191132312..191139972
Molecular Weight (calculated)
81541.8 Da
IEP (calculated)
7.584
GRAVY (calculated)
-0.447
Length
738 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAERDIKPF VSPIMATTIQ HRRSLHGPNA SQPTALASEH DGTPVLPQTQ PQAACVLNKA ASEVSGDVSD QSISAYETLE GTSTRRPCSA PRLSRKFWGA
101: GDYDAAAGRS TPQPLSLQNR MCVHPEFLHS NATSHKWPFG ALAELLDNAV DEIETGGATT ILLDKVTDKR NGSPAILIQD DGGGMDPDSL RRCMSFGFSE
201: KQSGSSIGQY GNGFKTSTMR LGADVIVFSR CTKSSGPTQS IGLLSYTFLV ETGHTDVVVP VVDYKCNLMK GQTQRLERHG SEQFFSNLSA LLKWSPFATE
301: EELMQNFCDI GPHGTKIIVF NLWSNDDGNL ELDFDTDPED IMISGAPNPE EIRNSVKRAN ENHLANRLRY SLRVYASVLY LQLPDYFRII LRGQEVKRHR
401: IAADLIYPEC ISYKPHSCGI KEATVLTTIG FLKGAPTISV HGFNIYHKNR LILPFHRVLN TSSSKGRSVS GVLEVDFIKP THDKQDFEKS QLFQKLINRL
501: KEMTNEYWEL YSDKIGYMKK PRVSAAPLPP PVMLPIANGT AEPSDRSAPA PTQPLRSHSN YLNAVPIASA PPGFHSAPVK AESVAPGAHM GYSPSSLNAQ
601: TMQVNGIKSP SMVPATDSVD TRKRRNDDTT TMTVAFKRKA TQDLAGSSCA TDEASTDNIA TKQVSGYMGM GERETKEFCF LKMENRMLRE ECSDFVMAEK
701: ALRLKEQNLR LEIEKAREQF KSLLNEYVSL SATPTQKR
101: GDYDAAAGRS TPQPLSLQNR MCVHPEFLHS NATSHKWPFG ALAELLDNAV DEIETGGATT ILLDKVTDKR NGSPAILIQD DGGGMDPDSL RRCMSFGFSE
201: KQSGSSIGQY GNGFKTSTMR LGADVIVFSR CTKSSGPTQS IGLLSYTFLV ETGHTDVVVP VVDYKCNLMK GQTQRLERHG SEQFFSNLSA LLKWSPFATE
301: EELMQNFCDI GPHGTKIIVF NLWSNDDGNL ELDFDTDPED IMISGAPNPE EIRNSVKRAN ENHLANRLRY SLRVYASVLY LQLPDYFRII LRGQEVKRHR
401: IAADLIYPEC ISYKPHSCGI KEATVLTTIG FLKGAPTISV HGFNIYHKNR LILPFHRVLN TSSSKGRSVS GVLEVDFIKP THDKQDFEKS QLFQKLINRL
501: KEMTNEYWEL YSDKIGYMKK PRVSAAPLPP PVMLPIANGT AEPSDRSAPA PTQPLRSHSN YLNAVPIASA PPGFHSAPVK AESVAPGAHM GYSPSSLNAQ
601: TMQVNGIKSP SMVPATDSVD TRKRRNDDTT TMTVAFKRKA TQDLAGSSCA TDEASTDNIA TKQVSGYMGM GERETKEFCF LKMENRMLRE ECSDFVMAEK
701: ALRLKEQNLR LEIEKAREQF KSLLNEYVSL SATPTQKR
001: MSHDRSVNVS HDAVIAKPER GTMLQSFSPR SHGSKGYSLP QDSEENRGSV GQSAGQSSTS VVDQVRSPAD DAGVTSSSTI CPAPVCRQFW KAGSYNDELS
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
101: SKSQQPNGKN YLHVHPMFLH SNATSHKWAF GAVAELLDNA VDEIQNGATF VIVDKTTNPR DGATALLIQD DGGGMDPQAM RHCMGFGFSD KKSDSAIGRY
201: GNGFKTSTMR LGADVIVFSR HSKNQTLTQS IGLLSYTYLT RTGHDRIVVP ILDYEFNASA GEFKTLQDRE HFISSLSILL EWSPFSTEAE LLQQFDDVGP
301: HGTKVIIYNM WLNSDAKLEL DFDSVAEDIL IEGSIKKTGS KIVNDHIASR FSYSLRVYLS ILYLRIPETF KIILRGKVVE HHNVADDLMH PQYILYKPQA
401: AGSEEALVVT TIGFLKEAPK VNLHGFCVYH KNRLIMPFWQ VINYSSSRGR GVVGVLEANF VEPTHNKQDF EKTVLLQKLE NRLKEMTVEY WSCHCVLIGY
501: QVNKKPRLQI PQKVQPAGRQ ALSPPPGFQA VFPQGNTTSL PRVSTQPVLL EKRKEHPDSV ASAALKRKVG NDDFTVPGHI RVEQFIHGSA SQSQDIETVK
601: LMEENKKLRA KCLDRKVRSQ NLEVKAMNLR SELENYKSEY ERLMVELQAL DLVKDEHRRN VNT
Arabidopsis Description
MORC6Protein MICRORCHIDIA 6 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.