Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 73.64 | 75.0 |
| GSMUA_Achr6P11510_001 | Banana | nucleus | 72.73 | 74.07 |
| Bra030990.1-P | Field mustard | nucleus | 67.27 | 66.07 |
| CDX81827 | Canola | nucleus | 67.27 | 66.07 |
| VIT_09s0002g01440.t01 | Wine grape | nucleus | 68.18 | 65.79 |
| CDY21748 | Canola | nucleus | 66.36 | 65.18 |
| AT1G17455.1 | Thale cress | nucleus | 63.64 | 61.4 |
| KRH47584 | Soybean | nucleus | 63.64 | 61.4 |
| KRH06171 | Soybean | nucleus | 63.64 | 61.4 |
| GSMUA_Achr9P29450_001 | Banana | cytosol | 61.82 | 60.71 |
| Bra016046.1-P | Field mustard | nucleus | 60.91 | 59.82 |
| CDX72930 | Canola | nucleus | 60.91 | 59.82 |
| CDX96422 | Canola | nucleus | 60.91 | 59.82 |
| Bra003872.1-P | Field mustard | cytosol | 54.55 | 59.41 |
| AT1G72630.1 | Thale cress | nucleus | 60.0 | 55.46 |
| Bra008041.1-P | Field mustard | nucleus | 57.27 | 54.78 |
| CDY11163 | Canola | cytosol | 55.45 | 45.52 |
| GSMUA_Achr10P... | Banana | cytosol | 50.91 | 34.57 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P01310_001 | EnsemblPlants:GSMUA_Achr8T01310_001 | EnsemblPlantsGene:GSMUA_Achr8G01310_001 | GO:GO:0008150 | GO:GO:0042753 | InterPro:EARLY_FLOWERING_4 |
| PANTHER:PTHR33469 | PANTHER:PTHR33469:SF3 | PFAM:PF07011 | UniParc:UPI000296B355 | UniProt:M0TLN3 | MapMan:27.1.6.3.3 |
Description
EARLY flowering protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G01310_001]
Coordinates
chr8:-:1107431..1108219
Molecular Weight (calculated)
12555.9 Da
IEP (calculated)
9.112
GRAVY (calculated)
-0.835
Length
110 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEERLPGIG DGATQVDNKV LQSLQKSFLQ VQSILDQNRL LINEINQNHE SKIPENLSRN VGLIRELNNN IQRVVGLYDD LSLSFSKSME ASPERDTKRK
101: LNQKRARPGQ
101: LNQKRARPGQ
001: MEGDTISRMM GSGVQMDGKI LQTFEKSFVQ VQNILDHNRL LINEINQNHE SKIPDNLGRN VGLIRELNNN VRRVAHLYVD LSNNFSKSME ASSEGDSSEG
101: RGNRRIRPA
101: RGNRRIRPA
Arabidopsis Description
EFL3Protein ELF4-LIKE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8F5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.