Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 3
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 71.43 | 74.07 |
| GSMUA_Achr6P11510_001 | Banana | nucleus | 70.54 | 73.15 |
| Os11t0621500-01 | Rice | nucleus | 66.07 | 63.25 |
| GSMUA_Achr8P01310_001 | Banana | nucleus | 60.71 | 61.82 |
| EES08878 | Sorghum | cytosol | 62.5 | 57.38 |
| Zm00001d048801_P001 | Maize | cytosol | 65.18 | 56.59 |
| HORVU4Hr1G030640.1 | Barley | cytosol | 64.29 | 53.73 |
| TraesCS4B01G149300.1 | Wheat | cytosol | 63.39 | 52.99 |
| TraesCS4D01G149000.1 | Wheat | cytosol | 63.39 | 52.21 |
| TraesCS4A01G146100.1 | Wheat | cytosol | 50.89 | 51.35 |
| GSMUA_Achr10P... | Banana | cytosol | 52.68 | 36.42 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P29450_001 | EnsemblPlants:GSMUA_Achr9T29450_001 | EnsemblPlantsGene:GSMUA_Achr9G29450_001 | GO:GO:0008150 | GO:GO:0042753 | InterPro:EARLY_FLOWERING_4 |
| PANTHER:PTHR33469 | PANTHER:PTHR33469:SF3 | PFAM:PF07011 | UniParc:UPI0002968306 | UniProt:M0U4K2 | MapMan:27.1.6.3.3 |
Description
EARLY flowering protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G29450_001]
Coordinates
chr9:+:33159691..33160029
Molecular Weight (calculated)
12387.5 Da
IEP (calculated)
7.090
GRAVY (calculated)
-0.571
Length
112 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGDTFSVH GNGNQVDNKA FHAFQKSFVQ VQSILNQNRL LINEINQNHE TMIPDNLGRN VGLIRELNNN IRRVVDLYAD LSLSFTGPME ASSGGDSGGK
101: LGHKRVRHVN ES
101: LGHKRVRHVN ES
001: MEGDTISRMM GSGVQMDGKI LQTFEKSFVQ VQNILDHNRL LINEINQNHE SKIPDNLGRN VGLIRELNNN VRRVAHLYVD LSNNFSKSME ASSEGDSSEG
101: RGNRRIRPA
101: RGNRRIRPA
Arabidopsis Description
EFL3Protein ELF4-LIKE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8F5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.