Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P11510_001 | Banana | nucleus | 38.89 | 58.33 |
| GSMUA_Achr10P... | Banana | nucleus | 38.89 | 58.33 |
| VIT_09s0002g01440.t01 | Wine grape | nucleus | 38.27 | 54.39 |
| GSMUA_Achr9P29450_001 | Banana | cytosol | 36.42 | 52.68 |
| GSMUA_Achr8P01310_001 | Banana | nucleus | 34.57 | 50.91 |
| KRH47584 | Soybean | nucleus | 33.33 | 47.37 |
| KRH06171 | Soybean | nucleus | 33.33 | 47.37 |
| CDX96422 | Canola | nucleus | 32.72 | 47.32 |
| CDY21748 | Canola | nucleus | 32.72 | 47.32 |
| CDX81827 | Canola | nucleus | 32.72 | 47.32 |
| CDX72930 | Canola | nucleus | 32.72 | 47.32 |
| Bra030990.1-P | Field mustard | nucleus | 32.72 | 47.32 |
| Bra016046.1-P | Field mustard | nucleus | 32.72 | 47.32 |
| AT1G17455.1 | Thale cress | nucleus | 32.72 | 46.49 |
| Bra003872.1-P | Field mustard | cytosol | 28.4 | 45.54 |
| Bra008041.1-P | Field mustard | nucleus | 31.48 | 44.35 |
| AT1G72630.1 | Thale cress | nucleus | 32.1 | 43.7 |
| CDY11163 | Canola | cytosol | 29.01 | 35.07 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P04030_001 | EnsemblPlants:GSMUA_Achr10T04030_001 | EnsemblPlantsGene:GSMUA_Achr10G04030_001 | GO:GO:0008150 | GO:GO:0042753 | InterPro:EARLY_FLOWERING_4 |
| PANTHER:PTHR33469 | PANTHER:PTHR33469:SF3 | PFAM:PF07011 | UniParc:UPI00029599AD | UniProt:M0RF80 | MapMan:27.1.6.3.3 |
Description
EARLY flowering protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G04030_001]
Coordinates
chr10:-:13559881..13565810
Molecular Weight (calculated)
18109.5 Da
IEP (calculated)
7.285
GRAVY (calculated)
-0.343
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGETFPVL GNGSQGDYKV MQTFHKSFGQ VQSRLDQNRK LINEINQNQA SRIPGRLNRN VRLIGELNSN IRRVVDVYVE LCLSFTGSME ASPEAGAASQ
101: GKPGHKRDIY YLLNISVSLK YEPFPFCICS ETYAYYDLPF CSSKEAIGEV LIGDRLVNAP YS
101: GKPGHKRDIY YLLNISVSLK YEPFPFCICS ETYAYYDLPF CSSKEAIGEV LIGDRLVNAP YS
001: MEGDTISRMM GSGVQMDGKI LQTFEKSFVQ VQNILDHNRL LINEINQNHE SKIPDNLGRN VGLIRELNNN VRRVAHLYVD LSNNFSKSME ASSEGDSSEG
101: RGNRRIRPA
101: RGNRRIRPA
Arabidopsis Description
EFL3Protein ELF4-LIKE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8F5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.