Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX72930 | Canola | nucleus | 89.08 | 94.64 |
| Bra016046.1-P | Field mustard | nucleus | 88.24 | 93.75 |
| CDX96422 | Canola | nucleus | 88.24 | 93.75 |
| Bra008041.1-P | Field mustard | nucleus | 89.92 | 93.04 |
| Bra003872.1-P | Field mustard | cytosol | 77.31 | 91.09 |
| AT1G17455.1 | Thale cress | nucleus | 85.71 | 89.47 |
| VIT_09s0002g01440.t01 | Wine grape | nucleus | 68.91 | 71.93 |
| CDY11163 | Canola | cytosol | 75.63 | 67.16 |
| KRH47584 | Soybean | nucleus | 63.03 | 65.79 |
| KRH06171 | Soybean | nucleus | 63.03 | 65.79 |
| AT2G06255.1 | Thale cress | nucleus | 59.66 | 65.14 |
| Os11t0621500-01 | Rice | nucleus | 63.87 | 64.96 |
| GSMUA_Achr8P01310_001 | Banana | nucleus | 55.46 | 60.0 |
| EES08878 | Sorghum | cytosol | 59.66 | 58.2 |
| HORVU4Hr1G030640.1 | Barley | cytosol | 63.03 | 55.97 |
| TraesCS4B01G149300.1 | Wheat | cytosol | 63.03 | 55.97 |
| TraesCS4D01G149000.1 | Wheat | cytosol | 63.03 | 55.15 |
| TraesCS4A01G146100.1 | Wheat | cytosol | 51.26 | 54.95 |
| Zm00001d048801_P001 | Maize | cytosol | 56.3 | 51.94 |
| AT2G40080.1 | Thale cress | nucleus | 30.25 | 32.43 |
| GSMUA_Achr10P... | Banana | cytosol | 43.7 | 32.1 |
| AT2G29950.1 | Thale cress | cytosol | 30.25 | 28.8 |
Protein Annotations
| MapMan:27.1.6.3.3 | EntrezGene:843595 | UniProt:A0A178WCV4 | ProteinID:AAG51839.1 | ProteinID:AEE35350.1 | ArrayExpress:AT1G72630 |
| EnsemblPlantsGene:AT1G72630 | RefSeq:AT1G72630 | TAIR:AT1G72630 | RefSeq:AT1G72630-TAIR-G | EnsemblPlants:AT1G72630.1 | TAIR:AT1G72630.1 |
| EMBL:AY039916 | EMBL:AY079311 | EMBL:AY085916 | InterPro:EARLY_FLOWERING_4 | Symbol:ELF4-L2 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009648 | GO:GO:0042753 | GO:GO:0042803 | GO:GO:0048511 |
| RefSeq:NP_565044.1 | ProteinID:OAP16279.1 | PFAM:PF07011 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PANTHER:PTHR33469 | PANTHER:PTHR33469:SF11 | UniProt:Q94BS8 | UniParc:UPI00000A984E | : | : |
Description
EFL2Protein ELF4-LIKE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94BS8]
Coordinates
chr1:+:27344181..27345585
Molecular Weight (calculated)
13409.6 Da
IEP (calculated)
6.806
GRAVY (calculated)
-0.858
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MESRMEGDVY SGFGERYQMD GKLLQNFQKS FVQVQDILDQ NRLLINEINQ NHESKQADHL GRNVGLIREL NNNIRTVASL YGDLSHSFAR SVDASSEGES
101: TGTLKSDGKA NNQKRFRSG
101: TGTLKSDGKA NNQKRFRSG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.