Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G17455.1 | Thale cress | nucleus | 72.81 | 72.81 |
| KRH47584 | Soybean | nucleus | 72.81 | 72.81 |
| KRH06171 | Soybean | nucleus | 72.81 | 72.81 |
| Bra003872.1-P | Field mustard | cytosol | 63.16 | 71.29 |
| Bra008041.1-P | Field mustard | nucleus | 70.18 | 69.57 |
| Os11t0621500-01 | Rice | nucleus | 71.05 | 69.23 |
| AT1G72630.1 | Thale cress | nucleus | 71.93 | 68.91 |
| GSMUA_Achr8P01310_001 | Banana | nucleus | 65.79 | 68.18 |
| CDX72930 | Canola | nucleus | 66.67 | 67.86 |
| Bra016046.1-P | Field mustard | nucleus | 65.79 | 66.96 |
| CDX96422 | Canola | nucleus | 65.79 | 66.96 |
| Bra030990.1-P | Field mustard | nucleus | 62.28 | 63.39 |
| CDX81827 | Canola | nucleus | 62.28 | 63.39 |
| CDY21748 | Canola | nucleus | 61.4 | 62.5 |
| VIT_11s0016g01370.t01 | Wine grape | nucleus | 78.95 | 60.4 |
| EES08878 | Sorghum | cytosol | 64.04 | 59.84 |
| HORVU4Hr1G030640.1 | Barley | cytosol | 65.79 | 55.97 |
| TraesCS4B01G149300.1 | Wheat | cytosol | 65.79 | 55.97 |
| TraesCS4D01G149000.1 | Wheat | cytosol | 65.79 | 55.15 |
| Zm00001d048801_P001 | Maize | cytosol | 62.28 | 55.04 |
| TraesCS4A01G146100.1 | Wheat | cytosol | 53.51 | 54.95 |
| CDY11163 | Canola | cytosol | 63.16 | 53.73 |
| GSMUA_Achr10P... | Banana | cytosol | 54.39 | 38.27 |
| VIT_06s0004g06600.t01 | Wine grape | nucleus | 35.09 | 32.0 |
| VIT_13s0067g00860.t01 | Wine grape | nucleus | 38.6 | 30.34 |
Protein Annotations
| EntrezGene:100266924 | wikigene:100266924 | MapMan:27.1.6.3.3 | ProteinID:CCB59303 | ProteinID:CCB59303.1 | InterPro:EARLY_FLOWERING_4 |
| UniProt:F6HXY0 | EMBL:FN596494 | GO:GO:0008150 | GO:GO:0042753 | EntrezGene:LOC100266924 | wikigene:LOC100266924 |
| PFAM:PF07011 | PANTHER:PTHR33469 | PANTHER:PTHR33469:SF3 | TIGR:TC54235 | UniParc:UPI0001983DAC | ArrayExpress:VIT_09s0002g01440 |
| EnsemblPlantsGene:VIT_09s0002g01440 | EnsemblPlants:VIT_09s0002g01440.t01 | RefSeq:XP_002275438 | RefSeq:XP_002275438.1 | RefSeq:XP_002275459 | RefSeq:XP_002275459.1 |
| RefSeq:XP_010654445.1 | RefSeq:XP_010654446.1 | RefSeq:XP_010654447.1 | : | : | : |
Description
No Description!
Coordinates
chr9:+:1223006..1224789
Molecular Weight (calculated)
12691.9 Da
IEP (calculated)
7.693
GRAVY (calculated)
-0.555
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGDIFSGIG NGTQVDSKVL QTFHKSFVQV QNLLDQNRLL INEINQNHES KIPDNLNRNV GLIRELNNNI RRVVDLYSDL SSSFAKSVEA SLEAESAGTL
101: KSDGKASQKR IRYG
101: KSDGKASQKR IRYG
001: MEGDVLSGFG DRHNMDGKLL QSFQKSFVDV QDILDQNRLL INEINQNHES KQPDNLGRNV GLIKELNNNI RRVASLYGDL SHSFARSVDA SSEGESSGTL
101: KSDGKANQKR FRSG
101: KSDGKANQKR FRSG
Arabidopsis Description
EFL4ELF4-L4 [Source:UniProtKB/TrEMBL;Acc:A0A178WKX5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.