Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH06171 | Soybean | nucleus | 100.0 | 100.0 |
| VIT_09s0002g01440.t01 | Wine grape | nucleus | 72.81 | 72.81 |
| KRH02638 | Soybean | nucleus | 71.93 | 71.93 |
| KRH19266 | Soybean | cytosol | 71.05 | 71.05 |
| AT1G17455.1 | Thale cress | nucleus | 67.54 | 67.54 |
| KRH37456 | Soybean | nucleus | 64.04 | 65.18 |
| KRH12520 | Soybean | cytosol | 64.04 | 65.18 |
| GSMUA_Achr8P01310_001 | Banana | nucleus | 61.4 | 63.64 |
| Bra003872.1-P | Field mustard | cytosol | 56.14 | 63.37 |
| Os11t0621500-01 | Rice | nucleus | 64.91 | 63.25 |
| AT1G72630.1 | Thale cress | nucleus | 65.79 | 63.03 |
| Bra008041.1-P | Field mustard | nucleus | 62.28 | 61.74 |
| CDX72930 | Canola | nucleus | 60.53 | 61.61 |
| CDX96422 | Canola | nucleus | 59.65 | 60.71 |
| CDX81827 | Canola | nucleus | 59.65 | 60.71 |
| Bra016046.1-P | Field mustard | nucleus | 59.65 | 60.71 |
| CDY21748 | Canola | nucleus | 58.77 | 59.82 |
| Bra030990.1-P | Field mustard | nucleus | 58.77 | 59.82 |
| EES08878 | Sorghum | cytosol | 57.02 | 53.28 |
| TraesCS4A01G146100.1 | Wheat | cytosol | 51.75 | 53.15 |
| TraesCS4B01G149300.1 | Wheat | cytosol | 60.53 | 51.49 |
| HORVU4Hr1G030640.1 | Barley | cytosol | 60.53 | 51.49 |
| TraesCS4D01G149000.1 | Wheat | cytosol | 60.53 | 50.74 |
| CDY11163 | Canola | cytosol | 58.77 | 50.0 |
| Zm00001d048801_P001 | Maize | cytosol | 55.26 | 48.84 |
| GSMUA_Achr10P... | Banana | cytosol | 47.37 | 33.33 |
| KRH31142 | Soybean | nucleus | 29.82 | 27.64 |
| KRG97737 | Soybean | nucleus, plastid | 30.7 | 25.55 |
| KRH17036 | Soybean | cytosol | 32.46 | 22.02 |
Protein Annotations
| EMBL:ACUP02004154 | EMBL:ACUP02009816 | EnsemblPlants:KRH47584 | EnsemblPlantsGene:GLYMA_07G037300 | EntrezGene:100305734 | GO:GO:0008150 |
| GO:GO:0042753 | InterPro:EARLY_FLOWERING_4 | PANTHER:PTHR33469 | PANTHER:PTHR33469:SF3 | PFAM:PF07011 | ProteinID:KRH06170.1 |
| ProteinID:KRH06171.1 | ProteinID:KRH47583.1 | ProteinID:KRH47584 | ProteinID:KRH47584.1 | UniParc:UPI00023C6EE2 | UniProt:I1MJZ6 |
| MapMan:27.1.6.3.3 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:-:3060761..3062726
Molecular Weight (calculated)
12780.0 Da
IEP (calculated)
7.544
GRAVY (calculated)
-0.725
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGDIFGELG NSTQVDSRLL QVFQKSLLQA QDILNQNRLL INEINQNHES KMPDNLSRNV GLIRELNSNI RRVVDLYADL SNSFTKSREA SSEGDSSGTL
101: KSDGKVNQKR IRSS
101: KSDGKVNQKR IRSS
001: MEGDVLSGFG DRHNMDGKLL QSFQKSFVDV QDILDQNRLL INEINQNHES KQPDNLGRNV GLIKELNNNI RRVASLYGDL SHSFARSVDA SSEGESSGTL
101: KSDGKANQKR FRSG
101: KSDGKANQKR FRSG
Arabidopsis Description
EFL4ELF4-L4 [Source:UniProtKB/TrEMBL;Acc:A0A178WKX5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.