Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21748 | Canola | nucleus | 94.64 | 94.64 |
| CDX81827 | Canola | nucleus | 91.07 | 91.07 |
| AT1G17455.1 | Thale cress | nucleus | 81.25 | 79.82 |
| Bra016046.1-P | Field mustard | nucleus | 75.89 | 75.89 |
| Bra003872.1-P | Field mustard | cytosol | 63.39 | 70.3 |
| Bra008041.1-P | Field mustard | nucleus | 70.54 | 68.7 |
| GSMUA_Achr8P01310_001 | Banana | nucleus | 66.07 | 67.27 |
| VIT_09s0002g01440.t01 | Wine grape | nucleus | 63.39 | 62.28 |
| Os11t0621500-01 | Rice | nucleus | 61.61 | 58.97 |
| KRH06171 | Soybean | nucleus | 59.82 | 58.77 |
| KRH47584 | Soybean | nucleus | 59.82 | 58.77 |
| EES08878 | Sorghum | cytosol | 58.93 | 54.1 |
| TraesCS4B01G149300.1 | Wheat | cytosol | 60.71 | 50.75 |
| HORVU4Hr1G030640.1 | Barley | cytosol | 60.71 | 50.75 |
| TraesCS4D01G149000.1 | Wheat | cytosol | 60.71 | 50.0 |
| TraesCS4A01G146100.1 | Wheat | cytosol | 49.11 | 49.55 |
| Zm00001d048801_P001 | Maize | cytosol | 55.36 | 48.06 |
| GSMUA_Achr10P... | Banana | cytosol | 47.32 | 32.72 |
| Bra017035.1-P | Field mustard | nucleus | 32.14 | 31.58 |
| Bra000165.1-P | Field mustard | nucleus | 32.14 | 31.58 |
| Bra004991.1-P | Field mustard | nucleus | 31.25 | 30.97 |
| Bra000468.1-P | Field mustard | cytosol | 37.5 | 30.43 |
Protein Annotations
| EnsemblPlants:Bra030990.1 | EnsemblPlants:Bra030990.1-P | EnsemblPlantsGene:Bra030990 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009648 |
| GO:GO:0042753 | InterPro:EARLY_FLOWERING_4 | PANTHER:PTHR33469 | PANTHER:PTHR33469:SF11 | PFAM:PF07011 | SEG:seg |
| UniParc:UPI0002542B53 | UniProt:M4EQB9 | MapMan:27.1.6.3.3 | : | : | : |
Description
AT1G17455 (E=3e-043) ELF4-L4 | ELF4-L4 (ELF4-Like 4)
Coordinates
chrA09:-:33070648..33070986
Molecular Weight (calculated)
12363.3 Da
IEP (calculated)
6.246
GRAVY (calculated)
-0.655
Length
112 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGSVVSGFG DRHTNADGKV LQSFQKSFVD VQDILDQNRL LINEINQNHE SNQPENLSRN VGLIKELNNN IRRVASLYGD LSHSFSRSVD ASSDGDSSGT
101: LGIINQKRFR SG
101: LGIINQKRFR SG
001: MEGDVLSGFG DRHNMDGKLL QSFQKSFVDV QDILDQNRLL INEINQNHES KQPDNLGRNV GLIKELNNNI RRVASLYGDL SHSFARSVDA SSEGESSGTL
101: KSDGKANQKR FRSG
101: KSDGKANQKR FRSG
Arabidopsis Description
EFL4ELF4-L4 [Source:UniProtKB/TrEMBL;Acc:A0A178WKX5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.