Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G72630.1 | Thale cress | nucleus | 89.47 | 85.71 |
| CDY21748 | Canola | nucleus | 80.7 | 82.14 |
| Bra030990.1-P | Field mustard | nucleus | 79.82 | 81.25 |
| CDX81827 | Canola | nucleus | 78.95 | 80.36 |
| VIT_09s0002g01440.t01 | Wine grape | nucleus | 72.81 | 72.81 |
| KRH47584 | Soybean | nucleus | 67.54 | 67.54 |
| KRH06171 | Soybean | nucleus | 67.54 | 67.54 |
| Os11t0621500-01 | Rice | nucleus | 68.42 | 66.67 |
| AT2G06255.1 | Thale cress | nucleus | 62.28 | 65.14 |
| GSMUA_Achr8P01310_001 | Banana | nucleus | 61.4 | 63.64 |
| EES08878 | Sorghum | cytosol | 63.16 | 59.02 |
| TraesCS4A01G146100.1 | Wheat | cytosol | 55.26 | 56.76 |
| HORVU4Hr1G030640.1 | Barley | cytosol | 66.67 | 56.72 |
| TraesCS4B01G149300.1 | Wheat | cytosol | 66.67 | 56.72 |
| TraesCS4D01G149000.1 | Wheat | cytosol | 66.67 | 55.88 |
| Zm00001d048801_P001 | Maize | cytosol | 60.53 | 53.49 |
| GSMUA_Achr10P... | Banana | cytosol | 46.49 | 32.72 |
| AT2G40080.1 | Thale cress | nucleus | 29.82 | 30.63 |
| AT2G29950.1 | Thale cress | cytosol | 33.33 | 30.4 |
Protein Annotations
| MapMan:27.1.6.3.3 | EntrezGene:838318 | UniProt:A0A178WKX5 | ProteinID:AAF79463.1 | ProteinID:AAF97300.1 | ProteinID:AEE29591.1 |
| ProteinID:AEE29592.1 | EMBL:AK220611 | ArrayExpress:AT1G17455 | EnsemblPlantsGene:AT1G17455 | RefSeq:AT1G17455 | TAIR:AT1G17455 |
| RefSeq:AT1G17455-TAIR-G | EnsemblPlants:AT1G17455.1 | TAIR:AT1G17455.1 | EMBL:AY085165 | EMBL:BT025588 | InterPro:EARLY_FLOWERING_4 |
| Symbol:ELF4-L4 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009648 | GO:GO:0042753 |
| GO:GO:0042803 | GO:GO:0048511 | RefSeq:NP_001154348.1 | RefSeq:NP_564024.1 | ProteinID:OAP18804.1 | PFAM:PF07011 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PANTHER:PTHR33469 | PANTHER:PTHR33469:SF11 | UniProt:Q570U6 | UniParc:UPI0000162DCB | : |
Description
EFL4ELF4-L4 [Source:UniProtKB/TrEMBL;Acc:A0A178WKX5]
Coordinates
chr1:+:5997057..5998599
Molecular Weight (calculated)
12663.7 Da
IEP (calculated)
6.806
GRAVY (calculated)
-0.814
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGDVLSGFG DRHNMDGKLL QSFQKSFVDV QDILDQNRLL INEINQNHES KQPDNLGRNV GLIKELNNNI RRVASLYGDL SHSFARSVDA SSEGESSGTL
101: KSDGKANQKR FRSG
101: KSDGKANQKR FRSG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.