Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004991.1-P | Field mustard | nucleus | 90.09 | 88.5 |
| CDX74810 | Canola | nucleus | 90.09 | 88.5 |
| CDY66370 | Canola | nucleus | 88.29 | 86.73 |
| CDY20512 | Canola | nucleus | 88.29 | 86.73 |
| CDY20515 | Canola | cytosol | 88.29 | 86.73 |
| CDY61710 | Canola | nucleus | 86.49 | 85.71 |
| CDY60339 | Canola | nucleus | 87.39 | 85.09 |
| CDY07627 | Canola | nucleus | 81.98 | 79.82 |
| Bra000165.1-P | Field mustard | nucleus | 81.08 | 78.95 |
| CDY07051 | Canola | nucleus | 80.18 | 78.07 |
| Bra017035.1-P | Field mustard | nucleus | 79.28 | 77.19 |
| KRH31142 | Soybean | nucleus | 52.25 | 47.15 |
| PGSC0003DMT400016935 | Potato | nucleus | 45.95 | 45.95 |
| PGSC0003DMT400089865 | Potato | nucleus | 50.45 | 44.09 |
| Solyc06g051660.1.1 | Tomato | nucleus | 46.85 | 42.98 |
| PGSC0003DMT400003078 | Potato | nucleus | 45.95 | 42.86 |
| Solyc06g051680.1.1 | Tomato | nucleus | 45.95 | 41.46 |
| KRG97737 | Soybean | nucleus, plastid | 50.45 | 40.88 |
| VIT_13s0067g00860.t01 | Wine grape | nucleus | 52.25 | 40.0 |
| AT2G29950.1 | Thale cress | cytosol | 38.74 | 34.4 |
| AT2G06255.1 | Thale cress | nucleus | 30.63 | 31.19 |
| AT1G72630.1 | Thale cress | nucleus | 32.43 | 30.25 |
| AT1G17455.1 | Thale cress | nucleus | 30.63 | 29.82 |
Protein Annotations
| MapMan:27.1.6.3.3 | EntrezGene:818596 | ProteinID:AAB95293.1 | ProteinID:AEC09773.1 | ArrayExpress:AT2G40080 | EnsemblPlantsGene:AT2G40080 |
| RefSeq:AT2G40080 | TAIR:AT2G40080 | RefSeq:AT2G40080-TAIR-G | EnsemblPlants:AT2G40080.1 | TAIR:AT2G40080.1 | EMBL:AY035183 |
| EMBL:AY062963 | EMBL:AY088748 | Unigene:At.14672 | InterPro:EARLY_FLOWERING_4 | Symbol:ELF4 | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009585 |
| GO:GO:0009605 | GO:GO:0009628 | GO:GO:0009648 | GO:GO:0009649 | GO:GO:0009791 | GO:GO:0009908 |
| GO:GO:0009909 | GO:GO:0009987 | GO:GO:0010017 | GO:GO:0010114 | GO:GO:0042753 | GO:GO:0042803 |
| GO:GO:0048511 | GO:GO:0048573 | GO:GO:0080167 | RefSeq:NP_565922.1 | UniProt:O04211 | PFAM:PF07011 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR33469 |
| PANTHER:PTHR33469:SF5 | UniParc:UPI000009CC33 | SEG:seg | : | : | : |
Description
ELF4Protein EARLY FLOWERING 4 [Source:UniProtKB/Swiss-Prot;Acc:O04211]
Coordinates
chr2:-:16734294..16734953
Molecular Weight (calculated)
12376.3 Da
IEP (calculated)
9.163
GRAVY (calculated)
-1.046
Length
111 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRNGETKRR RNVAEEAEQG EDPAMWENLD RNFRQVQSVL DRNRSLIQQV NDNHQSRMAD NMSKNVALIQ ELNGNISKVV NMYSDLNTSF SSGFHGGKNG
101: HDGGGAAGTR A
101: HDGGGAAGTR A
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.