Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400025499 | Potato | nucleus | 64.22 | 71.43 |
| PGSC0003DMT400050352 | Potato | cytosol | 67.89 | 67.89 |
| Solyc07g041340.1.1 | Tomato | cytosol | 66.97 | 66.97 |
| KRH02638 | Soybean | nucleus | 69.72 | 66.67 |
| KRH19266 | Soybean | cytosol | 68.81 | 65.79 |
| KRH37456 | Soybean | nucleus | 66.06 | 64.29 |
| AT1G17455.1 | Thale cress | nucleus | 65.14 | 62.28 |
| KRH12520 | Soybean | cytosol | 63.3 | 61.61 |
| AT1G72630.1 | Thale cress | nucleus | 65.14 | 59.66 |
| Solyc12g049290.1.1 | Tomato | cytosol | 62.39 | 59.65 |
| PGSC0003DMT400030304 | Potato | cytosol | 62.39 | 59.65 |
| Os11t0621500-01 | Rice | nucleus | 63.3 | 58.97 |
| EES08878 | Sorghum | cytosol | 62.39 | 55.74 |
| Zm00001d048801_P001 | Maize | cytosol | 61.47 | 51.94 |
| VIT_11s0016g01370.t01 | Wine grape | nucleus | 69.72 | 51.01 |
| HORVU4Hr1G030640.1 | Barley | cytosol | 62.39 | 50.75 |
| TraesCS4B01G149300.1 | Wheat | cytosol | 61.47 | 50.0 |
| TraesCS4D01G149000.1 | Wheat | cytosol | 61.47 | 49.26 |
| TraesCS4A01G146100.1 | Wheat | cytosol | 47.71 | 46.85 |
| AT2G40080.1 | Thale cress | nucleus | 31.19 | 30.63 |
| AT2G29950.1 | Thale cress | cytosol | 34.86 | 30.4 |
Protein Annotations
| MapMan:27.1.6.3.3 | EntrezGene:815182 | UniProt:A0A178VTU4 | ProteinID:AAM15312.1 | ProteinID:AEC06006.1 | ArrayExpress:AT2G06255 |
| EnsemblPlantsGene:AT2G06255 | RefSeq:AT2G06255 | TAIR:AT2G06255 | RefSeq:AT2G06255-TAIR-G | EnsemblPlants:AT2G06255.1 | TAIR:AT2G06255.1 |
| EMBL:AY086681 | ncoils:Coil | InterPro:EARLY_FLOWERING_4 | Symbol:ELF4-L3 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008150 |
| GO:GO:0042753 | GO:GO:0042803 | GO:GO:0048511 | RefSeq:NP_565334.1 | ProteinID:OAP08272.1 | PFAM:PF07011 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0004507 | PO:PO:0007115 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR33469 | PANTHER:PTHR33469:SF3 | UniProt:Q8S8F5 | UniParc:UPI00000AB03A |
Description
EFL3Protein ELF4-LIKE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8F5]
Coordinates
chr2:+:2457573..2459940
Molecular Weight (calculated)
12311.6 Da
IEP (calculated)
7.799
GRAVY (calculated)
-0.712
Length
109 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGDTISRMM GSGVQMDGKI LQTFEKSFVQ VQNILDHNRL LINEINQNHE SKIPDNLGRN VGLIRELNNN VRRVAHLYVD LSNNFSKSME ASSEGDSSEG
101: RGNRRIRPA
101: RGNRRIRPA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.