Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g049290.1.1 | Tomato | cytosol | 99.12 | 99.12 |
| PGSC0003DMT400025499 | Potato | nucleus | 62.28 | 72.45 |
| KRH02638 | Soybean | nucleus | 69.3 | 69.3 |
| PGSC0003DMT400050352 | Potato | cytosol | 65.79 | 68.81 |
| KRH19266 | Soybean | cytosol | 68.42 | 68.42 |
| KRH12520 | Soybean | cytosol | 65.79 | 66.96 |
| KRH37456 | Soybean | nucleus | 64.91 | 66.07 |
| Os11t0621500-01 | Rice | nucleus | 64.04 | 62.39 |
| AT2G06255.1 | Thale cress | nucleus | 59.65 | 62.39 |
| EES08878 | Sorghum | cytosol | 57.89 | 54.1 |
| HORVU4Hr1G030640.1 | Barley | cytosol | 62.28 | 52.99 |
| TraesCS4B01G149300.1 | Wheat | cytosol | 62.28 | 52.99 |
| TraesCS4A01G146100.1 | Wheat | cytosol | 50.88 | 52.25 |
| TraesCS4D01G149000.1 | Wheat | cytosol | 62.28 | 52.21 |
| Zm00001d048801_P001 | Maize | cytosol | 57.89 | 51.16 |
| PGSC0003DMT400016935 | Potato | nucleus | 28.95 | 29.73 |
| PGSC0003DMT400089865 | Potato | nucleus | 32.46 | 29.13 |
| PGSC0003DMT400003078 | Potato | nucleus | 28.95 | 27.73 |
| PGSC0003DMT400078042 | Potato | nucleus | 32.46 | 27.61 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400030304 | EnsemblPlantsGene:PGSC0003DMG400011596 | EntrezGene:102587775 | GO:GO:0008150 | GO:GO:0042753 | InterPro:EARLY_FLOWERING_4 |
| PANTHER:PTHR33469 | PANTHER:PTHR33469:SF3 | PFAM:PF07011 | PGSC:PGSC0003DMG400011596 | RefSeq:XP_006361341.1 | UniParc:UPI000295248F |
| UniProt:M1AU15 | MapMan:27.1.6.3.3 | : | : | : | : |
Description
ELF4 [Source:PGSC_GENE;Acc:PGSC0003DMG400011596]
Coordinates
chr12:-:52579471..52582357
Molecular Weight (calculated)
12908.0 Da
IEP (calculated)
4.824
GRAVY (calculated)
-0.674
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDVVFSCTG NGIQVDRKVV QTLQKNFVQV QNILDQNRLL INEINQNHES TIPDNLTRNV GLIRELNNNI RRVVDLYADL SSSVTTSMEA FSEGESNNAN
101: QSDQRDGQKR IRSS
101: QSDQRDGQKR IRSS
001: MEGDTISRMM GSGVQMDGKI LQTFEKSFVQ VQNILDHNRL LINEINQNHE SKIPDNLGRN VGLIRELNNN VRRVAHLYVD LSNNFSKSME ASSEGDSSEG
101: RGNRRIRPA
101: RGNRRIRPA
Arabidopsis Description
EFL3Protein ELF4-LIKE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8F5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.