Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g076960.1.1 | Tomato | cytosol | 95.52 | 95.52 |
| Solyc11g028200.1.1 | Tomato | cytosol, nucleus, plastid | 91.79 | 91.79 |
| VIT_06s0004g06600.t01 | Wine grape | nucleus | 38.81 | 41.6 |
| PGSC0003DMT400016935 | Potato | nucleus | 33.58 | 40.54 |
| PGSC0003DMT400025499 | Potato | nucleus | 28.36 | 38.78 |
| PGSC0003DMT400003078 | Potato | nucleus | 33.58 | 37.82 |
| PGSC0003DMT400089865 | Potato | nucleus | 34.33 | 36.22 |
| AT2G29950.1 | Thale cress | cytosol | 32.84 | 35.2 |
| PGSC0003DMT400050352 | Potato | cytosol | 27.61 | 33.95 |
| PGSC0003DMT400030304 | Potato | cytosol | 27.61 | 32.46 |
| CDX95740 | Canola | cytosol, mitochondrion, nucleus | 32.09 | 30.5 |
| KRH17036 | Soybean | cytosol | 37.31 | 29.76 |
| Bra000468.1-P | Field mustard | cytosol | 29.85 | 28.99 |
| CDX83315 | Canola | cytosol | 27.61 | 26.81 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400078042 | EnsemblPlantsGene:PGSC0003DMG400030357 | EntrezGene:102589345 | GO:GO:0008150 | GO:GO:0042753 | InterPro:EARLY_FLOWERING_4 |
| PANTHER:PTHR33469 | PANTHER:PTHR33469:SF1 | PFAM:PF07011 | PGSC:PGSC0003DMG400030357 | RefSeq:XP_006350838.1 | UniParc:UPI000296E090 |
| UniProt:M1CZA8 | MapMan:27.1.6.3.3 | : | : | : | : |
Description
ELF4 [Source:PGSC_GENE;Acc:PGSC0003DMG400030357]
Coordinates
chr6:+:57212675..57216008
Molecular Weight (calculated)
15361.7 Da
IEP (calculated)
4.447
GRAVY (calculated)
-0.763
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDTLQALKE LSNLSHHPLN GGEFNGLNDV DGEEEEGYDT EAWETITKCF REVQSVLDQN RALIQQVNEN HQSKLRDNLV KNVALIRDIN SNISKVSRLY
101: SDLSVDFCNI VHRRRELALF ESKNRDDNVD TAES
101: SDLSVDFCNI VHRRRELALF ESKNRDDNVD TAES
001: MKRNGETKRR RNVAEEAEQG EDPAMWENLD RNFRQVQSVL DRNRSLIQQV NDNHQSRMAD NMSKNVALIQ ELNGNISKVV NMYSDLNTSF SSGFHGGKNG
101: HDGGGAAGTR A
101: HDGGGAAGTR A
Arabidopsis Description
ELF4Protein EARLY FLOWERING 4 [Source:UniProtKB/Swiss-Prot;Acc:O04211]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.