Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_06s0004g06600.t01 | Wine grape | nucleus | 28.57 | 38.4 |
| KRH31142 | Soybean | nucleus | 27.38 | 37.4 |
| PGSC0003DMT400078042 | Potato | nucleus | 29.76 | 37.31 |
| Solyc06g076960.1.1 | Tomato | cytosol | 29.76 | 37.31 |
| AT2G29950.1 | Thale cress | cytosol | 26.79 | 36.0 |
| Solyc11g028200.1.1 | Tomato | cytosol, nucleus, plastid | 28.57 | 35.82 |
| KRG97737 | Soybean | nucleus, plastid | 29.17 | 35.77 |
| KRH02638 | Soybean | nucleus | 23.21 | 34.21 |
| KRH19266 | Soybean | cytosol | 23.21 | 34.21 |
| Bra000468.1-P | Field mustard | cytosol | 27.98 | 34.06 |
| CDX83315 | Canola | cytosol | 26.79 | 32.61 |
| KRH06171 | Soybean | nucleus | 22.02 | 32.46 |
| KRH47584 | Soybean | nucleus | 22.02 | 32.46 |
| KRH12520 | Soybean | cytosol | 21.43 | 32.14 |
| KRH37456 | Soybean | nucleus | 21.43 | 32.14 |
| CDX95740 | Canola | cytosol, mitochondrion, nucleus | 26.79 | 31.91 |
Protein Annotations
| EMBL:ACUP02009041 | EnsemblPlants:KRH17036 | EnsemblPlantsGene:GLYMA_14G193700 | EntrezGene:100793086 | GO:GO:0008150 | GO:GO:0042753 |
| InterPro:EARLY_FLOWERING_4 | PANTHER:PTHR33469 | PANTHER:PTHR33469:SF1 | PFAM:PF07011 | ProteinID:KRH17036 | ProteinID:KRH17036.1 |
| ProteinID:KRH17037.1 | SEG:seg | UniParc:UPI000233B29A | UniProt:K7M812 | MapMan:27.1.6.3.3 | : |
Description
hypothetical protein
Coordinates
chr14:+:45845502..45848481
Molecular Weight (calculated)
19087.8 Da
IEP (calculated)
4.191
GRAVY (calculated)
-0.802
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MDETAVTTKP DWLNNRARVA GERTEEFFCG GDDEEECDDE AWDMLTRSFW QAQTVLDENR ALIDEVNSNH ESKIPDNMAK NVGLITQIHG NISKVRSIYS
101: DLSVNFPNII RQRGVAAVNH RNRDGDVEED EDEAENSEEN SAEHVLDKSE MVELMAVGMR STLSAHRY
101: DLSVNFPNII RQRGVAAVNH RNRDGDVEED EDEAENSEEN SAEHVLDKSE MVELMAVGMR STLSAHRY
001: MEASRNRSLV GNNRSPEMNE NDGEDVAASA AVEDVEVWDT LSNGFKRAQL YLDQNRDLIQ RVNENHMSRI PDNVSRNVGL INEINGNISQ VMEIYSDLSL
101: NFAKKFDQRR RTTKDGDTTT TTTGS
101: NFAKKFDQRR RTTKDGDTTT TTTGS
Arabidopsis Description
EFL1Protein ELF4-LIKE 1 [Source:UniProtKB/Swiss-Prot;Acc:O80877]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.