Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000468.1-P | Field mustard | cytosol | 72.46 | 72.46 |
| CDX95740 | Canola | cytosol, mitochondrion, nucleus | 65.94 | 64.54 |
| AT2G29950.1 | Thale cress | cytosol | 44.2 | 48.8 |
| CDY20512 | Canola | nucleus | 29.71 | 36.28 |
| CDY20515 | Canola | cytosol | 29.71 | 36.28 |
| CDX74810 | Canola | nucleus | 29.71 | 36.28 |
| CDX81827 | Canola | nucleus | 28.99 | 35.71 |
| CDY21748 | Canola | nucleus | 28.99 | 35.71 |
| CDY66370 | Canola | nucleus | 28.99 | 35.4 |
| CDY60339 | Canola | nucleus | 28.99 | 35.09 |
| CDY61710 | Canola | nucleus | 28.26 | 34.82 |
| CDY07051 | Canola | nucleus | 28.26 | 34.21 |
| CDY07627 | Canola | nucleus | 28.26 | 34.21 |
| VIT_06s0004g06600.t01 | Wine grape | nucleus | 28.26 | 31.2 |
| Solyc06g076960.1.1 | Tomato | cytosol | 27.54 | 28.36 |
| CDX96422 | Canola | nucleus | 22.46 | 27.68 |
| CDX72930 | Canola | nucleus | 22.46 | 27.68 |
| PGSC0003DMT400078042 | Potato | nucleus | 26.81 | 27.61 |
| Solyc11g028200.1.1 | Tomato | cytosol, nucleus, plastid | 26.81 | 27.61 |
| KRH17036 | Soybean | cytosol | 32.61 | 26.79 |
| CDY11163 | Canola | cytosol | 23.91 | 24.63 |
Protein Annotations
| EnsemblPlants:CDX83315 | EnsemblPlantsGene:GSBRNA2T00138873001 | GO:GO:0008150 | GO:GO:0042753 | InterPro:EARLY_FLOWERING_4 | PANTHER:PTHR33469 |
| PANTHER:PTHR33469:SF1 | PFAM:PF07011 | ProteinID:CDX83315 | ProteinID:CDX83315.1 | SEG:seg | UniParc:UPI0004EE4581 |
| MapMan:27.1.6.3.3 | : | : | : | : | : |
Description
BnaA03g21910D
Coordinates
chrLK031832:+:995349..995765
Molecular Weight (calculated)
15534.1 Da
IEP (calculated)
8.225
GRAVY (calculated)
-0.796
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAPRRRSIV GNNRKSSKRA LTEMNKDDVH VTAAEKEEFN DVKVWNTLSS GFKRAQLVLD ENRDLIRRVN DNHLSRIPEN VSRNVGLINE INGNISRVME
101: IYTDLAVDFS KRIEEAKSGD TDTTTSGSYG CGQSSCRS
101: IYTDLAVDFS KRIEEAKSGD TDTTTSGSYG CGQSSCRS
001: MEASRNRSLV GNNRSPEMNE NDGEDVAASA AVEDVEVWDT LSNGFKRAQL YLDQNRDLIQ RVNENHMSRI PDNVSRNVGL INEINGNISQ VMEIYSDLSL
101: NFAKKFDQRR RTTKDGDTTT TTTGS
101: NFAKKFDQRR RTTKDGDTTT TTTGS
Arabidopsis Description
EFL1Protein ELF4-LIKE 1 [Source:UniProtKB/Swiss-Prot;Acc:O80877]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.