Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX95740 | Canola | cytosol, mitochondrion, nucleus | 55.2 | 48.94 |
| Bra000468.1-P | Field mustard | cytosol | 48.8 | 44.2 |
| CDX83315 | Canola | cytosol | 48.8 | 44.2 |
| AT2G40080.1 | Thale cress | nucleus | 34.4 | 38.74 |
| VIT_06s0004g06600.t01 | Wine grape | nucleus | 35.2 | 35.2 |
| AT2G06255.1 | Thale cress | nucleus | 30.4 | 34.86 |
| Solyc06g076960.1.1 | Tomato | cytosol | 36.0 | 33.58 |
| AT1G17455.1 | Thale cress | nucleus | 30.4 | 33.33 |
| PGSC0003DMT400078042 | Potato | nucleus | 35.2 | 32.84 |
| Solyc11g028200.1.1 | Tomato | cytosol, nucleus, plastid | 34.4 | 32.09 |
| AT1G72630.1 | Thale cress | nucleus | 28.8 | 30.25 |
| KRH17036 | Soybean | cytosol | 36.0 | 26.79 |
Protein Annotations
| MapMan:27.1.6.3.3 | EntrezGene:817545 | ProteinID:AAC31857.1 | ProteinID:AAX55132.1 | ProteinID:AEC08326.1 | ArrayExpress:AT2G29950 |
| EnsemblPlantsGene:AT2G29950 | RefSeq:AT2G29950 | TAIR:AT2G29950 | RefSeq:AT2G29950-TAIR-G | EnsemblPlants:AT2G29950.1 | TAIR:AT2G29950.1 |
| EMBL:AY648325 | Unigene:At.50818 | InterPro:EARLY_FLOWERING_4 | Symbol:ELF4-L1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008150 |
| GO:GO:0042753 | GO:GO:0042803 | GO:GO:0048511 | RefSeq:NP_180556.1 | UniProt:O80877 | PFAM:PF07011 |
| PO:PO:0000293 | PANTHER:PTHR33469 | PANTHER:PTHR33469:SF1 | UniParc:UPI00000AA2A0 | SEG:seg | : |
Description
EFL1Protein ELF4-LIKE 1 [Source:UniProtKB/Swiss-Prot;Acc:O80877]
Coordinates
chr2:+:12767585..12768437
Molecular Weight (calculated)
14081.2 Da
IEP (calculated)
4.609
GRAVY (calculated)
-0.873
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MEASRNRSLV GNNRSPEMNE NDGEDVAASA AVEDVEVWDT LSNGFKRAQL YLDQNRDLIQ RVNENHMSRI PDNVSRNVGL INEINGNISQ VMEIYSDLSL
101: NFAKKFDQRR RTTKDGDTTT TTTGS
101: NFAKKFDQRR RTTKDGDTTT TTTGS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.