Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- nucleus 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g076960.1.1 | Tomato | cytosol | 95.52 | 95.52 |
| PGSC0003DMT400078042 | Potato | nucleus | 91.79 | 91.79 |
| VIT_06s0004g06600.t01 | Wine grape | nucleus | 37.31 | 40.0 |
| Solyc06g051660.1.1 | Tomato | nucleus | 33.58 | 37.19 |
| Solyc06g051680.1.1 | Tomato | nucleus | 32.84 | 35.77 |
| Solyc07g041340.1.1 | Tomato | cytosol | 28.36 | 34.86 |
| AT2G29950.1 | Thale cress | cytosol | 32.09 | 34.4 |
| Solyc12g049290.1.1 | Tomato | cytosol | 29.1 | 34.21 |
| CDX95740 | Canola | cytosol, mitochondrion, nucleus | 32.09 | 30.5 |
| Bra000468.1-P | Field mustard | cytosol | 30.6 | 29.71 |
| KRH17036 | Soybean | cytosol | 35.82 | 28.57 |
| CDX83315 | Canola | cytosol | 27.61 | 26.81 |
Protein Annotations
| EnsemblPlants:Solyc11g028200.1.1 | EnsemblPlantsGene:Solyc11g028200.1 | GO:GO:0008150 | GO:GO:0042753 | InterPro:EARLY_FLOWERING_4 | ncoils:Coil |
| PANTHER:PTHR33469 | PANTHER:PTHR33469:SF1 | PFAM:PF07011 | SEG:seg | UniParc:UPI0002769946 | UniProt:K4D7G1 |
| MapMan:27.1.6.3.3 | : | : | : | : | : |
Description
No Description!
Coordinates
chr11:+:20547963..20548367
Molecular Weight (calculated)
15319.6 Da
IEP (calculated)
4.197
GRAVY (calculated)
-0.670
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDALQALTE LSNLSCHPLN GGKFNGLNDV NGEEEEEYDT EAWETITKCF REVQSVLDQN RALIQQVNEN HQSKLRDNLV KNVALIRDIN SNISKVSRLY
101: SDLSIDFCNI VNQRWELALF ESKNRDDNVD SAES
101: SDLSIDFCNI VNQRWELALF ESKNRDDNVD SAES
001: MKRNGETKRR RNVAEEAEQG EDPAMWENLD RNFRQVQSVL DRNRSLIQQV NDNHQSRMAD NMSKNVALIQ ELNGNISKVV NMYSDLNTSF SSGFHGGKNG
101: HDGGGAAGTR A
101: HDGGGAAGTR A
Arabidopsis Description
ELF4Protein EARLY FLOWERING 4 [Source:UniProtKB/Swiss-Prot;Acc:O04211]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.