Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400050352 | Potato | cytosol | 97.25 | 97.25 |
| KRH02638 | Soybean | nucleus | 83.49 | 79.82 |
| KRH19266 | Soybean | cytosol | 82.57 | 78.95 |
| KRH37456 | Soybean | nucleus | 70.64 | 68.75 |
| KRH12520 | Soybean | cytosol | 69.72 | 67.86 |
| AT2G06255.1 | Thale cress | nucleus | 66.97 | 66.97 |
| Os11t0621500-01 | Rice | nucleus | 71.56 | 66.67 |
| VIT_11s0016g01370.t01 | Wine grape | nucleus | 89.91 | 65.77 |
| Solyc12g049290.1.1 | Tomato | cytosol | 67.89 | 64.91 |
| EES08878 | Sorghum | cytosol | 69.72 | 62.3 |
| Zm00001d048801_P001 | Maize | cytosol | 70.64 | 59.69 |
| TraesCS4B01G149300.1 | Wheat | cytosol | 67.89 | 55.22 |
| HORVU4Hr1G030640.1 | Barley | cytosol | 67.89 | 55.22 |
| TraesCS4A01G146100.1 | Wheat | cytosol | 55.96 | 54.95 |
| TraesCS4D01G149000.1 | Wheat | cytosol | 67.89 | 54.41 |
| Solyc06g051660.1.1 | Tomato | nucleus | 35.78 | 32.23 |
| Solyc06g051680.1.1 | Tomato | nucleus | 33.95 | 30.08 |
| Solyc06g076960.1.1 | Tomato | cytosol | 34.86 | 28.36 |
| Solyc11g028200.1.1 | Tomato | cytosol, nucleus, plastid | 34.86 | 28.36 |
Protein Annotations
| EnsemblPlants:Solyc07g041340.1.1 | EnsemblPlantsGene:Solyc07g041340.1 | GO:GO:0008150 | GO:GO:0042753 | InterPro:EARLY_FLOWERING_4 | PANTHER:PTHR33469 |
| PANTHER:PTHR33469:SF3 | PFAM:PF07011 | UniParc:UPI000276B9FF | UniProt:K4CE07 | MapMan:27.1.6.3.3 | : |
Description
No Description!
Coordinates
chr7:-:52434822..52435151
Molecular Weight (calculated)
12208.3 Da
IEP (calculated)
7.520
GRAVY (calculated)
-0.638
Length
109 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGDTFSVLG NNGTQIDGKV FQTFQKSFVQ VQNLLDQNRL LINEINQNHE SKIPDNLSRN VGLIRELNNN IRRVVDLYAD LSCSFTKSVD ASSEGDSTGK
101: ATHKRNKPL
101: ATHKRNKPL
001: MEGDTISRMM GSGVQMDGKI LQTFEKSFVQ VQNILDHNRL LINEINQNHE SKIPDNLGRN VGLIRELNNN VRRVAHLYVD LSNNFSKSME ASSEGDSSEG
101: RGNRRIRPA
101: RGNRRIRPA
Arabidopsis Description
EFL3Protein ELF4-LIKE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8F5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.