Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016046.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDX72930 | Canola | nucleus | 97.32 | 97.32 |
| AT1G72630.1 | Thale cress | nucleus | 93.75 | 88.24 |
| CDY21748 | Canola | nucleus | 75.89 | 75.89 |
| CDX81827 | Canola | nucleus | 75.0 | 75.0 |
| VIT_09s0002g01440.t01 | Wine grape | nucleus | 66.96 | 65.79 |
| CDY11163 | Canola | cytosol | 75.0 | 62.69 |
| Os11t0621500-01 | Rice | nucleus | 64.29 | 61.54 |
| GSMUA_Achr8P01310_001 | Banana | nucleus | 59.82 | 60.91 |
| KRH06171 | Soybean | nucleus | 60.71 | 59.65 |
| KRH47584 | Soybean | nucleus | 60.71 | 59.65 |
| EES08878 | Sorghum | cytosol | 58.93 | 54.1 |
| TraesCS4B01G149300.1 | Wheat | cytosol | 63.39 | 52.99 |
| HORVU4Hr1G030640.1 | Barley | cytosol | 63.39 | 52.99 |
| TraesCS4D01G149000.1 | Wheat | cytosol | 63.39 | 52.21 |
| TraesCS4A01G146100.1 | Wheat | cytosol | 50.89 | 51.35 |
| Zm00001d048801_P001 | Maize | cytosol | 58.93 | 51.16 |
| GSMUA_Achr10P... | Banana | cytosol | 47.32 | 32.72 |
| CDY07051 | Canola | nucleus | 33.04 | 32.46 |
| CDY20512 | Canola | nucleus | 32.14 | 31.86 |
| CDY07627 | Canola | nucleus | 32.14 | 31.58 |
| CDY61710 | Canola | nucleus | 31.25 | 31.25 |
| CDY66370 | Canola | nucleus | 31.25 | 30.97 |
| CDY20515 | Canola | cytosol | 31.25 | 30.97 |
| CDX74810 | Canola | nucleus | 31.25 | 30.97 |
| CDY60339 | Canola | nucleus | 31.25 | 30.7 |
| CDX95740 | Canola | cytosol, mitochondrion, nucleus | 33.04 | 26.24 |
| CDX83315 | Canola | cytosol | 27.68 | 22.46 |
Protein Annotations
| EnsemblPlants:CDX96422 | EnsemblPlantsGene:GSBRNA2T00102587001 | GO:GO:0008150 | GO:GO:0042753 | InterPro:EARLY_FLOWERING_4 | PANTHER:PTHR33469 |
| PANTHER:PTHR33469:SF11 | PFAM:PF07011 | ProteinID:CDX96422 | ProteinID:CDX96422.1 | UniParc:UPI0002541C43 | MapMan:27.1.6.3.3 |
Description
BnaA07g30330D
Coordinates
chrLK031894:+:771651..772846
Molecular Weight (calculated)
12640.7 Da
IEP (calculated)
6.517
GRAVY (calculated)
-0.800
Length
112 amino acids
Sequence
(BLAST)
(BLAST)
001: MESRMEGDVF SGFGERHQMD GKVLQSFQKS FVQVQDILDQ NRLLINEINQ NHESKQADHL GRNVGLIREL NNNIRTVASL YGDLSHSFAR SIDASSEGES
101: TGTNNQKRFR SG
101: TGTNNQKRFR SG
001: MESRMEGDVY SGFGERYQMD GKLLQNFQKS FVQVQDILDQ NRLLINEINQ NHESKQADHL GRNVGLIREL NNNIRTVASL YGDLSHSFAR SVDASSEGES
101: TGTLKSDGKA NNQKRFRSG
101: TGTLKSDGKA NNQKRFRSG
Arabidopsis Description
EFL2Protein ELF4-LIKE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94BS8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.