Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER92496 | Sorghum | nucleus | 83.9 | 89.8 |
| Os03t0268100-01 | Rice | nucleus | 73.09 | 77.53 |
| TraesCS4A01G093700.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 70.55 | 75.34 |
| TraesCS4B01G210700.2 | Wheat | cytosol | 69.28 | 74.66 |
| TraesCS4D01G211400.1 | Wheat | cytosol | 69.7 | 74.43 |
| Zm00001d028569_P002 | Maize | cytosol | 83.9 | 68.16 |
| HORVU4Hr1G060500.11 | Barley | cytosol, nucleus | 64.62 | 61.49 |
| GSMUA_Achr2P16570_001 | Banana | nucleus | 51.91 | 55.81 |
| CDY22263 | Canola | cytosol | 11.02 | 52.53 |
| VIT_06s0004g05490.t01 | Wine grape | nucleus | 48.73 | 51.45 |
| AT5G59210.1 | Thale cress | nucleus | 47.25 | 51.38 |
| KRH23112 | Soybean | nucleus | 46.4 | 50.58 |
| KRH10215 | Soybean | cytosol | 45.55 | 49.65 |
| Solyc09g055760.2.1 | Tomato | nucleus | 44.07 | 47.17 |
| CDY02864 | Canola | extracellular, golgi, vacuole | 32.42 | 46.79 |
Protein Annotations
| EnsemblPlants:Zm00001d047834_P004 | EnsemblPlants:Zm00001d047834_T004 | EnsemblPlantsGene:Zm00001d047834 | ncoils:Coil | ProteinID:AQL07748.1 | ProteinID:AQL07752.1 |
| SEG:seg | UniParc:UPI00084298C5 | UniProt:A0A1D6PDV0 | MapMan:35.2 | : | : |
Description
myosin heavy chain-related
Coordinates
chr9:+:142795903..142800053
Molecular Weight (calculated)
53989.4 Da
IEP (calculated)
5.357
GRAVY (calculated)
-0.711
Length
472 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAHASRGRR TLEEIRQKRA AERMQHALPI AASHVDSHGC YTYMLRSTPH LITIRCGNQR AGAELLARVQ ELENGNTELV RENKMLLSKI DEKGVEKDAL
101: VNRLNDLERN VVPSLQKNLN DISLEKDAAV VAKEDALAQL RSMKKRLKEA EEEQYKAEED SASLRAQLNT LQQQVMGHSY SGYTMGISTE ESVAMEKEIQ
201: DLQAQLKQES LLRQQEQQKL AEESQLRQQE QEKLAKEQIH IASLEAEKQQ LEDQITMLTK KATGMEDTYT YANLSFIMSG KTTVHASKHQ DREKLENQLH
301: DMALMIERLE GSRQKLLMEI DSQSSEIEKL FEENSALSTS YQEAIAITVQ WENQVRDCLK QNEELRSHLE KLRLEQASLL EVSNITTKSD GQIENSISNL
401: PEMVTENISL KGQLIKEQSR SESLLAEIMK LSAELRKAVQ AQNNLVRLYR PVLRDIESNL MKMKQETYAT IQ
101: VNRLNDLERN VVPSLQKNLN DISLEKDAAV VAKEDALAQL RSMKKRLKEA EEEQYKAEED SASLRAQLNT LQQQVMGHSY SGYTMGISTE ESVAMEKEIQ
201: DLQAQLKQES LLRQQEQQKL AEESQLRQQE QEKLAKEQIH IASLEAEKQQ LEDQITMLTK KATGMEDTYT YANLSFIMSG KTTVHASKHQ DREKLENQLH
301: DMALMIERLE GSRQKLLMEI DSQSSEIEKL FEENSALSTS YQEAIAITVQ WENQVRDCLK QNEELRSHLE KLRLEQASLL EVSNITTKSD GQIENSISNL
401: PEMVTENISL KGQLIKEQSR SESLLAEIMK LSAELRKAVQ AQNNLVRLYR PVLRDIESNL MKMKQETYAT IQ
001: MESHHASLGR RTLEEIRQKR AAQRLSKASS GPDLSEIPNP ADFPVIRKSE SGNRLSETDV GALYSQLKEL QKKNAEMEER NKILSSKLQT KEVENESLET
101: RLNVLEQNTV PSLRKALKEI AMEKDAAVVL REDLSAQVRT LKRRVNQAEE EQYRAEEDAA SLRAELNSIQ QQAMGNSFAG MSPMGVSPDQ LPILEKEMAN
201: LKLELQKESV LRQQEQHRLA EEQTRVASLM SEKQELEQKI SVLSSRASEV SESGQKVFSV EDKEKLEKQL HDMAVALERL ESSRQKLLME IDNQSSEIEK
301: LFEENSNLSA SYQESINISN QWENQVKECL KQNVELREVL DKLRTEQAGS FSRGPSEFEA NGSHGTDTLS LKGELAKEQS RAESLSAQVL QLSAQLQQAT
401: QAYNGLMRIY KPVLRNIESS LIKLKQDGSV TVAQ
101: RLNVLEQNTV PSLRKALKEI AMEKDAAVVL REDLSAQVRT LKRRVNQAEE EQYRAEEDAA SLRAELNSIQ QQAMGNSFAG MSPMGVSPDQ LPILEKEMAN
201: LKLELQKESV LRQQEQHRLA EEQTRVASLM SEKQELEQKI SVLSSRASEV SESGQKVFSV EDKEKLEKQL HDMAVALERL ESSRQKLLME IDNQSSEIEK
301: LFEENSNLSA SYQESINISN QWENQVKECL KQNVELREVL DKLRTEQAGS FSRGPSEFEA NGSHGTDTLS LKGELAKEQS RAESLSAQVL QLSAQLQQAT
401: QAYNGLMRIY KPVLRNIESS LIKLKQDGSV TVAQ
Arabidopsis Description
AT5g59210/mnc17_100 [Source:UniProtKB/TrEMBL;Acc:Q8RY08]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.