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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, plasma membrane, endoplasmic reticulum, plastid

Predictor Summary:
  • plastid 1
  • golgi 2
  • extracellular 1
  • plasma membrane 2
  • endoplasmic reticulum 2
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, plasma membrane, plastid
Any Predictor:plastid, secretory
ChloroP:plastid
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d018045_P001
Zm00001d037221_P001
Zm00001d044836_P001
Zm00001d052256_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G54320.1 Zm00001d018045_P001 AT3G47620.1 21798944
AT1G54320.1 Zm00001d037221_P001 AT3G47620.1 21798944
AT1G54320.1 Zm00001d044836_P001 AT3G47620.1 21798944
AT1G54320.1 Zm00001d052256_P001 AT3G47620.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER88783 Sorghum plasma membrane, plastid 96.28 95.45
TraesCS7B01G384400.1 Wheat plasma membrane 85.1 84.62
Os06t0665000-01 Rice plasma membrane 86.53 84.36
TraesCS7D01G469100.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane, plastid 85.1 84.14
TraesCS7A01G482200.1 Wheat plasma membrane 84.53 84.05
Zm00001d053778_P001 Maize plasma membrane 76.22 76.22
Zm00001d015401_P001 Maize plastid 75.64 75.64
HORVU0Hr1G022300.1 Barley endoplasmic reticulum 85.1 74.81
GSMUA_Achr11P... Banana plasma membrane, plastid 73.35 72.93
Zm00001d046948_P004 Maize plasma membrane 87.68 72.86
GSMUA_Achr6P20180_001 Banana plastid 72.49 72.08
KRH43674 Soybean plasma membrane, plastid 68.77 69.77
CDY10503 Canola plastid 69.34 69.74
CDY42411 Canola plastid 68.77 69.16
AT1G54320.1 Thale cress plastid 69.05 69.05
KRH13775 Soybean plasma membrane, plastid 67.91 68.9
KRH13042 Soybean plasma membrane 67.34 68.31
AT3G12740.1 Thale cress plastid 67.34 67.14
KRH44838 Soybean plasma membrane, plastid 65.9 66.86
Bra001467.1-P Field mustard plastid 66.48 66.48
CDY08407 Canola plasma membrane, plastid 65.04 66.18
Bra034736.1-P Field mustard plasma membrane, plastid 65.04 66.18
Solyc05g054800.1.1 Tomato nucleus 66.19 66.0
Bra030808.1-P Field mustard plastid 68.19 65.93
CDY42174 Canola plastid 65.9 65.71
CDX79320 Canola plasma membrane 63.32 64.81
CDX67994 Canola plasma membrane 62.75 64.04
Bra003610.1-P Field mustard plasma membrane 62.46 63.74
AT1G16360.2 Thale cress plastid 63.32 63.14
CDX67738 Canola endoplasmic reticulum, extracellular, peroxisome 33.52 62.9
AT1G79450.1 Thale cress plasma membrane 63.04 62.86
Zm00001d038750_P006 Maize plasma membrane 60.17 61.95
Zm00001d027401_P001 Maize plasma membrane 60.17 61.76
CDX81761 Canola plastid 61.89 61.71
CDY51005 Canola plastid 61.89 61.71
VIT_19s0085g00850.t01 Wine grape plastid 67.91 56.03
Zm00001d034351_P001 Maize plasma membrane 54.44 55.07
Zm00001d021371_P001 Maize plasma membrane 57.02 51.69
PGSC0003DMT400060190 Potato plasma membrane 67.62 39.6
CDY00796 Canola plastid 67.05 36.91
CDX73805 Canola plastid 66.48 36.42
Bra026722.1-P Field mustard cytosol, golgi, plasma membrane 61.89 31.72
Protein Annotations
MapMan:24.1.2.4.1.2MapMan:5.8.2.1.1.2UniProt:A0A1D6LQ52ProteinID:AQK81615.1InterPro:CDC50/LEM3_famGO:GO:0005575
GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0051301PFAM:PF03381
PIRSF:PIRSF015840PANTHER:PTHR10926PANTHER:PTHR10926:SF30TMHMM:TMhelixUniParc:UPI0002219341EnsemblPlantsGene:Zm00001d036654
EnsemblPlants:Zm00001d036654_P002EnsemblPlants:Zm00001d036654_T002SEG:seg:::
Description
ALA-interacting subunit 1
Coordinates
chr6:-:96552802..96556599
Molecular Weight (calculated)
39359.2 Da
IEP (calculated)
9.695
GRAVY (calculated)
-0.332
Length
349 amino acids
Sequence
(BLAST)
001: MNSHAAGTSN GGPGDAAAAR RNTRMPKYSK FTQQELPACK PILTPKWVVS VFFIVGVIFV PIGVVSLLAA RDVVEIIDRY DEACVPGNMT ENKLAYIQNE
101: TLSKECIRNL TVTKDMKQPI FVYYELGNFY QNHRRYVKSR NDAQLRDASK ANQTSACEPE KTTANGQPIV PCGLIAWSLF NDTYNFTRGN ENLTVDKKDI
201: SWKSDREHKF GKDVYPSNFQ NGALKGGATL DPKIPLSEQE DLIVWMRTAA LPTFRKLYGR IYIDLKENDT ITVTLNNNYN TYSFGGKKKL VLSTATWLGG
301: KNDFLGFAYL IVGGLCIFLA FAFTLLYFVK PRKLGDHNYL SWNRRHAGR
Best Arabidopsis Sequence Match ( AT1G54320.1 )
(BLAST)
001: MSSNTASSSA GAAGSGDSSA ARKNSKRPKY SKFTQQELPA CKPILTPGWV ISTFLIVSVI FIPLGVISLF ASQDVVEIVD RYDTECIPAP ARTNKVAYIQ
101: GDGDKVCNRD LKVTKRMKQP IYVYYQLENF YQNHRRYVKS RSDSQLRSTK YENQISACKP EDDVGGQPIV PCGLIAWSLF NDTYALSRNN VSLAVNKKGI
201: AWKSDKEHKF GNKVFPKNFQ KGNITGGATL DPRIPLSEQE DLIVWMRTAA LPTFRKLYGK IESDLEMGDT IHVKLNNNYN TYSFNGKKKL VLSTTSWLGG
301: KNDFLGIAYL TVGGICFILA LAFTIMYLVK PRRLGDPSYL SWNRNPGGR
Arabidopsis Description
ALIS3ALA-interacting subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLK2]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.