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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • endoplasmic reticulum 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:endoplasmic reticulum, plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
PProwler:plastid
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d018045_P001
Zm00001d037221_P001
Zm00001d044836_P001
Zm00001d052256_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G54320.1 Zm00001d018045_P001 AT3G47620.1 21798944
AT1G54320.1 Zm00001d037221_P001 AT3G47620.1 21798944
AT1G54320.1 Zm00001d044836_P001 AT3G47620.1 21798944
AT1G54320.1 Zm00001d052256_P001 AT3G47620.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES06351 Sorghum plastid 91.69 91.69
Zm00001d053778_P001 Maize plasma membrane 91.12 91.12
TraesCS6B01G183800.1 Wheat plasma membrane, plastid 81.66 81.9
TraesCS6D01G145600.2 Wheat plasma membrane, plastid 81.38 81.61
TraesCS6A01G155600.1 Wheat plasma membrane, plastid 81.09 81.32
Os02t0173800-01 Rice plasma membrane 79.66 79.43
HORVU6Hr1G031530.3 Barley plastid 78.22 77.56
Zm00001d036654_P002 Maize endoplasmic reticulum, golgi, plasma membrane, plastid 75.64 75.64
GSMUA_Achr11P... Banana plasma membrane, plastid 73.07 72.65
CDY10503 Canola plastid 70.2 70.61
GSMUA_Achr6P20180_001 Banana plastid 70.49 70.09
CDY42411 Canola plastid 69.63 70.03
AT1G54320.1 Thale cress plastid 68.77 68.77
KRH13042 Soybean plasma membrane 67.34 68.31
Bra001467.1-P Field mustard plastid 67.62 67.62
KRH43674 Soybean plasma membrane, plastid 66.48 67.44
KRH44838 Soybean plasma membrane, plastid 66.19 67.15
AT3G12740.1 Thale cress plastid 67.05 66.86
Bra030808.1-P Field mustard plastid 69.05 66.76
KRH13775 Soybean plasma membrane, plastid 65.62 66.57
CDY08407 Canola plasma membrane, plastid 64.76 65.89
Bra034736.1-P Field mustard plasma membrane, plastid 64.47 65.6
Solyc05g054800.1.1 Tomato nucleus 65.62 65.43
CDY42174 Canola plastid 65.04 64.86
CDX79320 Canola plasma membrane 62.18 63.64
CDX67738 Canola endoplasmic reticulum, extracellular, peroxisome 33.81 63.44
CDY51005 Canola plastid 63.61 63.43
CDX81761 Canola plastid 63.61 63.43
Zm00001d027401_P001 Maize plasma membrane 61.6 63.24
AT1G16360.2 Thale cress plastid 63.32 63.14
AT1G79450.1 Thale cress plasma membrane 63.32 63.14
Zm00001d038750_P006 Maize plasma membrane 61.32 63.13
CDX67994 Canola plasma membrane 61.6 62.87
Bra003610.1-P Field mustard plasma membrane 61.32 62.57
Zm00001d046948_P004 Maize plasma membrane 71.35 59.29
VIT_19s0085g00850.t01 Wine grape plastid 66.48 54.85
Zm00001d034351_P001 Maize plasma membrane 51.0 51.59
Zm00001d021371_P001 Maize plasma membrane 56.73 51.43
PGSC0003DMT400060190 Potato plasma membrane 67.62 39.6
CDY00796 Canola plastid 68.48 37.7
CDX73805 Canola plastid 67.62 37.05
Bra026722.1-P Field mustard cytosol, golgi, plasma membrane 63.04 32.31
Protein Annotations
EnsemblPlants:Zm00001d015401_P001EnsemblPlants:Zm00001d015401_T001EnsemblPlantsGene:Zm00001d015401GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:CDC50/LEM3_famPANTHER:PTHR10926PANTHER:PTHR10926:SF30PFAM:PF03381PIRSF:PIRSF015840ProteinID:AQK68782.1
SEG:segTMHMM:TMhelixUniParc:UPI0001CAEC32UniProt:A0A1D6H1M6MapMan:5.8.2.1.1.2MapMan:24.1.2.4.1.2
Description
ALA-interacting subunit 1
Coordinates
chr5:-:88448697..88451738
Molecular Weight (calculated)
39464.5 Da
IEP (calculated)
9.930
GRAVY (calculated)
-0.345
Length
349 amino acids
Sequence
(BLAST)
001: MDSHAAVSSS VGSGDGAAQP RRNSRKPKYS KFTQQELPAC KPILTPKWVI SVFVLVGVIF VPIGIVSLRA SHQVVEIVDR YDDACIPANV TEKLAYIQND
101: SIPKTCTRNL TITKDMKQPI FVYYQLDNFY QNHRRYVKSR NDAQLRDKSK ASDTTNCDPE AKTVDGKPIV PCGLIAWSLF NDTYTLIHNN KTLRVDKKDI
201: SWKSDRDHKF GSDVFPTNFQ KGPLQGGKIL NPKIPLSEQE DLIVWMRTAA LPTFRKLYGR IHVDLKENDT ITVQLENNYN TYSFSGKKKL VLSTATWIGG
301: KNDFLGLAYL TVGGICFVLA FAFTLLYLIK PRKMGDNNYL SWNRPTLGR
Best Arabidopsis Sequence Match ( AT1G54320.1 )
(BLAST)
001: MSSNTASSSA GAAGSGDSSA ARKNSKRPKY SKFTQQELPA CKPILTPGWV ISTFLIVSVI FIPLGVISLF ASQDVVEIVD RYDTECIPAP ARTNKVAYIQ
101: GDGDKVCNRD LKVTKRMKQP IYVYYQLENF YQNHRRYVKS RSDSQLRSTK YENQISACKP EDDVGGQPIV PCGLIAWSLF NDTYALSRNN VSLAVNKKGI
201: AWKSDKEHKF GNKVFPKNFQ KGNITGGATL DPRIPLSEQE DLIVWMRTAA LPTFRKLYGK IESDLEMGDT IHVKLNNNYN TYSFNGKKKL VLSTTSWLGG
301: KNDFLGIAYL TVGGICFILA LAFTIMYLVK PRRLGDPSYL SWNRNPGGR
Arabidopsis Description
ALIS3ALA-interacting subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLK2]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.