Factsheet for Bra034736.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 5
plasma membrane 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08407	Canola	plasma membrane, plastid	99.71	99.71
CDY42174	Canola	plastid	99.42	97.43
Bra001467.1-P	Field mustard	plastid	90.38	88.83
AT3G12740.1	Thale cress	plastid	86.3	84.57
Bra030808.1-P	Field mustard	plastid	84.55	80.33
Bra003610.1-P	Field mustard	plasma membrane	72.3	72.51
KRH43674	Soybean	plasma membrane, plastid	71.72	71.51
GSMUA_Achr6P20180_001	Banana	plastid	72.3	70.66
KRH13775	Soybean	plasma membrane, plastid	70.85	70.64
Solyc05g054800.1.1	Tomato	nucleus	71.72	70.29
KRH44838	Soybean	plasma membrane, plastid	70.26	70.06
KRH13042	Soybean	plasma membrane	69.97	69.77
GSMUA_Achr11P...	Banana	plasma membrane, plastid	68.51	66.95
Os02t0173800-01	Rice	plasma membrane	68.22	66.86
TraesCS6D01G145600.2	Wheat	plasma membrane, plastid	66.76	65.8
TraesCS6B01G183800.1	Wheat	plasma membrane, plastid	66.76	65.8
TraesCS6A01G155600.1	Wheat	plasma membrane, plastid	66.47	65.52
Zm00001d036654_P002	Maize	endoplasmic reticulum, golgi, plasma membrane, plastid	66.18	65.04
Zm00001d053778_P001	Maize	plasma membrane	65.6	64.47
Zm00001d015401_P001	Maize	plastid	65.6	64.47
EES06351	Sorghum	plastid	65.6	64.47
Os06t0665000-01	Rice	plasma membrane	67.06	64.25
TraesCS7A01G482200.1	Wheat	plasma membrane	65.6	64.1
TraesCS7B01G384400.1	Wheat	plasma membrane	65.6	64.1
EER88783	Sorghum	plasma membrane, plastid	65.6	63.92
TraesCS7D01G469100.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane, plastid	65.6	63.74
HORVU6Hr1G031530.3	Barley	plastid	63.27	61.65
HORVU0Hr1G022300.1	Barley	endoplasmic reticulum	66.76	57.68
VIT_19s0085g00850.t01	Wine grape	plastid	70.85	57.45
Bra017577.1-P	Field mustard	plasma membrane	53.35	53.51
Zm00001d046948_P004	Maize	plasma membrane	62.68	51.19
PGSC0003DMT400060190	Potato	plasma membrane	72.89	41.95
Bra026722.1-P	Field mustard	cytosol, golgi, plasma membrane	71.14	35.83

Protein Annotations

EnsemblPlants:Bra034736.1	EnsemblPlants:Bra034736.1-P	EnsemblPlantsGene:Bra034736	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:CDC50/LEM3_fam	PANTHER:PTHR10926	PANTHER:PTHR10926:SF45	PFAM:PF03381	PIRSF:PIRSF015840	SEG:seg
TMHMM:TMhelix	UniParc:UPI000254737D	UniProt:M4F0Z1	MapMan:5.8.2.1.1.2	MapMan:24.1.2.4.1.2	:

Description

AT3G12740 (E=2e-168) ALIS1 | ALIS1 (ALA-INTERACTING SUBUNIT 1); phospholipid transporter

Coordinates

chrA05:-:21209648..21211314

Molecular Weight (calculated)

38460.2 Da

IEP (calculated)

9.919

GRAVY (calculated)

-0.336

Length

343 amino acids

Sequence
(BLAST)

001: MPSNTASSSS APAGSSKSKR PKYSKFTQQE LPACKPILTP GWVILTFLVI SVIFIPLGVV SLFASQDVVE IVDRYDNDCV PTPARANKVA YIQGGSDKSC
101: NRTLVVPKKM KQPIYVYYQL ENFYQNHRRY VKSRSDSQLR SVKDENQIDA CKPEDDVNGR PIVPCGLIAW SLFNDTYALS KNNQPLTVNK RGIAWKSDRE
201: HKFGKNVFPK NFQEGNITGG GRLDANKSLS EQEDLIVWMR TAALPTFRKL YGKIESDLEK GDTIHVTLLN NYNTYSFDGK KKLVLSTTSW LGGKNDFLGI
301: AYLTVGGICF FLALVFTIMY LVKPRRLGDP TYLSWNRVPG GGR

Best Arabidopsis Sequence Match ( AT3G12740.1 )
(BLAST)

001: MSSSNTPSSS AAAAGSIDSS AARRNSKRPK YSKFTQQELP ACKPILTPGW VISTFLIISV IFIPLGVISL FASQDVVEIV DRYDSACIPL SDRANKVAYI
101: QGTGNKSCTR TLIVPKRMKQ PIYVYYQLEN FYQNHRRYVK SRSDSQLRSV KDENQIDACK PEDDFGGQPI VPCGLIAWSL FNDTYVLSRN NQGLTVNKKG
201: IAWKSDKEHK FGKNVFPKNF QKGNLTGGAS LDPNKPLSDQ EDLIVWMRTA ALPTFRKLYG KIESDLEKGE NIQVTLQNNY NTYSFSGKKK LVLSTTSWLG
301: GKNDFLGIAY LTVGGICFVL ALAFTVMYLV KPRRLGDPTY LSWNRIPGGR

Arabidopsis Description

ALIS1ALA-interacting subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTW0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.