Factsheet for Bra001467.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
plasma membrane 4
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034736.1-P	Field mustard	plasma membrane, plastid	88.83	90.38
AT3G12740.1	Thale cress	plastid	84.24	84.0
Bra030808.1-P	Field mustard	plastid	85.39	82.55
KRH43674	Soybean	plasma membrane, plastid	71.63	72.67
Bra003610.1-P	Field mustard	plasma membrane	71.06	72.51
KRH13775	Soybean	plasma membrane, plastid	70.49	71.51
KRH13042	Soybean	plasma membrane	69.05	70.06
GSMUA_Achr6P20180_001	Banana	plastid	70.2	69.8
Solyc05g054800.1.1	Tomato	nucleus	69.91	69.71
KRH44838	Soybean	plasma membrane, plastid	68.48	69.48
GSMUA_Achr11P...	Banana	plasma membrane, plastid	68.19	67.81
Zm00001d015401_P001	Maize	plastid	67.62	67.62
Zm00001d036654_P002	Maize	endoplasmic reticulum, golgi, plasma membrane, plastid	66.48	66.48
TraesCS6D01G145600.2	Wheat	plasma membrane, plastid	66.19	66.38
Os02t0173800-01	Rice	plasma membrane	66.48	66.29
TraesCS6B01G183800.1	Wheat	plasma membrane, plastid	65.9	66.09
TraesCS6A01G155600.1	Wheat	plasma membrane, plastid	65.9	66.09
EER88783	Sorghum	plasma membrane, plastid	66.48	65.91
Zm00001d053778_P001	Maize	plasma membrane	65.9	65.9
TraesCS7A01G482200.1	Wheat	plasma membrane	65.9	65.53
TraesCS7B01G384400.1	Wheat	plasma membrane	65.9	65.53
EES06351	Sorghum	plastid	65.33	65.33
Os06t0665000-01	Rice	plasma membrane	66.76	65.08
TraesCS7D01G469100.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane, plastid	65.62	64.87
HORVU6Hr1G031530.3	Barley	plastid	62.75	62.22
VIT_19s0085g00850.t01	Wine grape	plastid	72.21	59.57
HORVU0Hr1G022300.1	Barley	endoplasmic reticulum	67.05	58.94
CDX73805	Canola	plastid	99.43	54.47
Bra017577.1-P	Field mustard	plasma membrane	52.72	53.8
Zm00001d046948_P004	Maize	plasma membrane	63.04	52.38
PGSC0003DMT400060190	Potato	plasma membrane	71.06	41.61
Bra026722.1-P	Field mustard	cytosol, golgi, plasma membrane	69.91	35.83

Protein Annotations

EnsemblPlants:Bra001467.1	EnsemblPlants:Bra001467.1-P	EnsemblPlantsGene:Bra001467	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:CDC50/LEM3_fam	PANTHER:PTHR10926	PANTHER:PTHR10926:SF45	PFAM:PF03381	PIRSF:PIRSF015840	SEG:seg
TMHMM:TMhelix	UniParc:UPI0002540807	UniProt:M4CB87	MapMan:5.8.2.1.1.2	MapMan:24.1.2.4.1.2	:

Description

AT3G12740 (E=2e-169) ALIS1 | ALIS1 (ALA-INTERACTING SUBUNIT 1); phospholipid transporter

Coordinates

chrA03:+:16502190..16504126

Molecular Weight (calculated)

39054.0 Da

IEP (calculated)

9.871

GRAVY (calculated)

-0.261

Length

349 amino acids

Sequence
(BLAST)

001: MPSNTASSSA AAGSADSSTS RRNSKRPKYS KFTQQELPAC KPILTPGWVI LTFLVISVIF IPLGVVSLFA SQDVVEIVDR YDNDCIPAPA RANKVAFIQG
101: AADKTCNRTI VVPKKMKQPI YVYYELENFY QNHRRYVKSR SDAQLRSVKD ENQIDACKPE DDVNGKPIVP CGLIAWSLFN DTYVLSKNNQ ALNVSKKGIA
201: WKSDREHKFG KNVFPKNFQM GNITGGGKLI PDVPLSEQED LIVWMRTAAL PTFRKLYGKI ETDLQENDTI HVILKNNYNT YSFDGKKKLV LSTTSWLGGK
301: NDFLGIAYLT VGGICFFLAL AFTIMYLVKP RRLGDPTYLS WNRVPGGGR

Best Arabidopsis Sequence Match ( AT3G12740.1 )
(BLAST)

001: MSSSNTPSSS AAAAGSIDSS AARRNSKRPK YSKFTQQELP ACKPILTPGW VISTFLIISV IFIPLGVISL FASQDVVEIV DRYDSACIPL SDRANKVAYI
101: QGTGNKSCTR TLIVPKRMKQ PIYVYYQLEN FYQNHRRYVK SRSDSQLRSV KDENQIDACK PEDDFGGQPI VPCGLIAWSL FNDTYVLSRN NQGLTVNKKG
201: IAWKSDKEHK FGKNVFPKNF QKGNLTGGAS LDPNKPLSDQ EDLIVWMRTA ALPTFRKLYG KIESDLEKGE NIQVTLQNNY NTYSFSGKKK LVLSTTSWLG
301: GKNDFLGIAY LTVGGICFVL ALAFTVMYLV KPRRLGDPTY LSWNRIPGGR

Arabidopsis Description

ALIS1ALA-interacting subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTW0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.