Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003610.1-P | Field mustard | plasma membrane | 99.71 | 99.71 |
| CDX79320 | Canola | plasma membrane | 98.25 | 98.53 |
| AT1G79450.1 | Thale cress | plasma membrane | 89.18 | 87.14 |
| CDX81761 | Canola | plastid | 85.09 | 83.14 |
| CDY51005 | Canola | plastid | 84.8 | 82.86 |
| CDY08407 | Canola | plasma membrane, plastid | 72.51 | 72.3 |
| CDY10503 | Canola | plastid | 72.81 | 71.76 |
| CDY42411 | Canola | plastid | 72.51 | 71.47 |
| CDY42174 | Canola | plastid | 73.1 | 71.43 |
| KRH13042 | Soybean | plasma membrane | 68.42 | 68.02 |
| KRH44838 | Soybean | plasma membrane, plastid | 68.42 | 68.02 |
| GSMUA_Achr6P20180_001 | Banana | plastid | 69.3 | 67.52 |
| KRH13775 | Soybean | plasma membrane, plastid | 66.37 | 65.99 |
| KRH43674 | Soybean | plasma membrane, plastid | 65.79 | 65.41 |
| Solyc05g054800.1.1 | Tomato | nucleus | 66.08 | 64.57 |
| GSMUA_Achr11P... | Banana | plasma membrane, plastid | 66.08 | 64.39 |
| TraesCS7B01G384400.1 | Wheat | plasma membrane | 64.91 | 63.25 |
| TraesCS7A01G482200.1 | Wheat | plasma membrane | 64.91 | 63.25 |
| Os02t0173800-01 | Rice | plasma membrane | 64.33 | 62.86 |
| Zm00001d036654_P002 | Maize | endoplasmic reticulum, golgi, plasma membrane, plastid | 64.04 | 62.75 |
| TraesCS7D01G469100.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 64.62 | 62.61 |
| CDX67738 | Canola | endoplasmic reticulum, extracellular, peroxisome | 33.92 | 62.37 |
| EER88783 | Sorghum | plasma membrane, plastid | 63.45 | 61.65 |
| Zm00001d015401_P001 | Maize | plastid | 62.87 | 61.6 |
| Zm00001d053778_P001 | Maize | plasma membrane | 62.57 | 61.32 |
| TraesCS6D01G145600.2 | Wheat | plasma membrane, plastid | 62.28 | 61.21 |
| TraesCS6A01G155600.1 | Wheat | plasma membrane, plastid | 61.99 | 60.92 |
| TraesCS6B01G183800.1 | Wheat | plasma membrane, plastid | 61.99 | 60.92 |
| Os06t0665000-01 | Rice | plasma membrane | 63.45 | 60.61 |
| EES06351 | Sorghum | plastid | 61.7 | 60.46 |
| HORVU6Hr1G031530.3 | Barley | plastid | 59.65 | 57.95 |
| HORVU0Hr1G022300.1 | Barley | endoplasmic reticulum | 65.5 | 56.42 |
| VIT_19s0085g00850.t01 | Wine grape | plastid | 68.42 | 55.32 |
| CDY35146 | Canola | plasma membrane | 54.09 | 54.09 |
| CDY03242 | Canola | golgi, peroxisome, plasma membrane, plastid | 54.09 | 54.09 |
| CDX77634 | Canola | golgi | 17.25 | 52.21 |
| Zm00001d046948_P004 | Maize | plasma membrane | 61.11 | 49.76 |
| CDY00796 | Canola | plastid | 73.1 | 39.43 |
| PGSC0003DMT400060190 | Potato | plasma membrane | 68.42 | 39.26 |
| CDX73805 | Canola | plastid | 72.81 | 39.09 |
Protein Annotations
| EnsemblPlants:CDX67994 | EnsemblPlantsGene:GSBRNA2T00099210001 | GO:A0A078BW30 | GO:GO:0005575 | GO:GO:0016020 | InterPro:CDC50/LEM3_fam |
| PANTHER:PTHR10926 | PANTHER:PTHR10926:SF45 | PFAM:PF03381 | PIRSF:PIRSF015840 | ProteinID:CDX67994 | ProteinID:CDX67994.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE1FEC | MapMan:5.8.2.1.1.2 | MapMan:24.1.2.4.1.2 | : |
Description
BnaA07g20340D
Coordinates
chrLK031787:-:3246878..3249284
Molecular Weight (calculated)
38185.8 Da
IEP (calculated)
9.181
GRAVY (calculated)
-0.314
Length
342 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSGGGGGPS EPSGVKKTSK RPKYSRFTQQ ELPACKPILT PSWVILTFLV AGVVFIPLGV ICLFASQGVI EIVDRYDTDC VPESSRANKV GYIQGEGDKM
101: CNRTITVTKT MKHPVYVYYQ LENYYQNHRR YVKSRNDAQL RSPKEENDVQ TCAPEDNVAG HPIVPCGLVA WSLFNDTYKF SRNSQELLVN KKDISWKSDR
201: DSKFGKNVYP KNFQTGAPIG GGILDPKKPL SEQEDLIVWM RTAALPIFRK LYGKIETDLN AGDTIMVLLE NNYNTYSFNG EKKLVLSTTS WLGGRNDFLG
301: VAYLTVGSIC LFLAVTFSVL YLVKPRQLGD PSYLSWNRSP GG
101: CNRTITVTKT MKHPVYVYYQ LENYYQNHRR YVKSRNDAQL RSPKEENDVQ TCAPEDNVAG HPIVPCGLVA WSLFNDTYKF SRNSQELLVN KKDISWKSDR
201: DSKFGKNVYP KNFQTGAPIG GGILDPKKPL SEQEDLIVWM RTAALPIFRK LYGKIETDLN AGDTIMVLLE NNYNTYSFNG EKKLVLSTTS WLGGRNDFLG
301: VAYLTVGSIC LFLAVTFSVL YLVKPRQLGD PSYLSWNRSP GG
001: MSSTAASSTV GGGGSSEISG VKKTSKRPKY SRFTQQELPA CKPILTPRWV ILTFLVAGVV FIPLGVICLF ASQGVVEIVD RYDTDCIPTS SRNNMVAYIQ
101: GEGDKICKRT ITVTKAMKHP VYVYYQLENF YQNHRRYVKS RNDAQLRSPK EEHDVKTCAP EDNVGGEPIV PCGLVAWSLF NDTYSFSRNS QQLLVNKKGI
201: SWKSDRENKF GKNVFPKNFQ KGAPIGGGTL NISKPLSEQE DLIVWMRTAA LPTFRKLYGK IETDLHAGDT ITVLLQNNYN TYSFNGQKKL VLSTTSWLGG
301: RNDFLGIAYL TVGSICLFLA VTFAVLYLVK PRQLGDPSYL SWNRSAGGLQ
101: GEGDKICKRT ITVTKAMKHP VYVYYQLENF YQNHRRYVKS RNDAQLRSPK EEHDVKTCAP EDNVGGEPIV PCGLVAWSLF NDTYSFSRNS QQLLVNKKGI
201: SWKSDRENKF GKNVFPKNFQ KGAPIGGGTL NISKPLSEQE DLIVWMRTAA LPTFRKLYGK IETDLHAGDT ITVLLQNNYN TYSFNGQKKL VLSTTSWLGG
301: RNDFLGIAYL TVGSICLFLA VTFAVLYLVK PRQLGDPSYL SWNRSAGGLQ
Arabidopsis Description
ALIS5ALA-interacting subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8W0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.