CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG96225
KRG97711
KRH01966
KRH05167
KRH07953
KRH11576
KRH14933
KRH15886
KRH31163
KRH33344
KRH36588
KRH51187
KRH52439
KRH61771
KRH67971
KRH69706
KRH70391
KRH73205

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G49210.1	KRH05167	AT2G25490.1	21798944
AT5G49210.1	KRH15886	AT2G25490.1	21798944
AT5G49210.1	KRH52439	AT2G25490.1	21798944
AT5G49210.1	KRH61771	AT2G25490.1	21798944
AT5G49210.1	KRG97711	AT3G08530.1	21798944
AT5G49210.1	KRH14933	AT3G08530.1	21798944
AT5G49210.1	KRH31163	AT3G08530.1	21798944
AT5G49210.1	KRH73205	AT3G08530.1	21798944
AT5G49210.1	KRG96225	AT3G11590.1	21798944
AT5G49210.1	KRH67971	AT3G11590.1	21798944
AT5G49210.1	KRH01966	AT4G17220.1	21798944
AT5G49210.1	KRH11576	AT4G17220.1	21798944
AT5G49210.1	KRH36588	AT4G17220.1	21798944
AT5G49210.1	KRH51187	AT4G17220.1	21798944
AT5G49210.1	KRH07953	AT5G11980.1	21798944
AT5G49210.1	KRH69706	AT5G11980.1	21798944
AT5G49210.1	KRH33344	AT5G51110.1	21798944
AT5G49210.1	KRH70391	AT5G51110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01771	Soybean	mitochondrion	87.64	89.14
Solyc05g053730.2.1	Tomato	nucleus	55.06	49.0
PGSC0003DMT400040750	Potato	mitochondrion	54.49	48.5
VIT_05s0029g01220.t01	Wine grape	mitochondrion	52.81	47.96
AT5G49210.1	Thale cress	mitochondrion	50.56	46.15
CDY56435	Canola	mitochondrion	50.0	46.11
Zm00001d004927_P001	Maize	mitochondrion	47.75	45.7
OQU82869	Sorghum	mitochondrion	46.63	45.6
CDX86248	Canola	mitochondrion	49.44	45.6
TraesCS4B01G134100.1	Wheat	mitochondrion	48.88	45.55
TraesCS4A01G184600.1	Wheat	mitochondrion	48.88	45.55
Bra037430.1-P	Field mustard	mitochondrion	48.88	45.08
TraesCS4D01G129000.1	Wheat	mitochondrion	48.31	45.03
Os11t0148600-01	Rice	mitochondrion	45.51	43.55
Bra020657.1-P	Field mustard	mitochondrion, nucleus	47.75	43.15
CDY33924	Canola	mitochondrion, nucleus	47.75	43.15
GSMUA_Achr1P11210_001	Banana	mitochondrion	47.19	39.44
HORVU4Hr1G025670.1	Barley	mitochondrion	47.19	38.89
Os12t0146400-01	Rice	mitochondrion	23.03	38.68
CDY70877	Canola	mitochondrion	48.88	38.5
KXG38100	Sorghum	plastid	29.78	23.14

Protein Annotations

EMBL:ACUP02005367	EnsemblPlants:KRH46915	EnsemblPlantsGene:GLYMA_08G364400	EntrezGene:100527774	ncoils:Coil	PANTHER:PTHR36402
ProteinID:KRH46915	ProteinID:KRH46915.1	SEG:seg	UniParc:UPI00023CA538	UniProt:I1KZK6	MapMan:35.2

Description

hypothetical protein

Coordinates

chr8:+:47558665..47560970

Molecular Weight (calculated)

21521.1 Da

IEP (calculated)

10.399

GRAVY (calculated)

-1.109

Length

178 amino acids

Sequence
(BLAST)

001: MFRSLLRRPF STTSARALKH CENHEFLSKN SFLGSWDAPR DPKEAEAKLT RLRREYALQV KEVRKEYIRE MEVMKIEKER KDEARREALR VANEERKKLK
101: AQAAQLRAQE RDIERQQFRE TLLKERAEKL ENWKMKVKMH EEKKAEKKEF LHRQSSAWIE EGNLEKKVVE AMVEIMHL

Best Arabidopsis Sequence Match ( AT5G49210.1 )
(BLAST)

001: MAFCNKLSRF VRRQSENASM IGSLRSFSAD ATHHRFHQET HNFLEPEYYI GSWEAPSDPK DAERKLAQLR RDYAKKVRVY RKEYIHEIEM LRVEKQRKDE
101: ARLLAERAAN EERRLLKAEA AKVRAEERKI ADEEFRQTLI KERAEKLEMW KMMGQKREEK IKEREKLLRE QSSLWIEQKE LERKITEALV DNVVL

Arabidopsis Description

AT5g49210/K21P3_8 [Source:UniProtKB/TrEMBL;Acc:Q945P2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.