Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G32880.1 | Thale cress | cytosol | 23.7 | 49.73 |
| AT5G52000.1 | Thale cress | cytosol | 47.92 | 41.72 |
| AT3G06720.2 | Thale cress | cytosol | 53.39 | 38.53 |
| AT5G49310.1 | Thale cress | cytosol | 49.74 | 36.8 |
| AT4G16143.2 | Thale cress | cytosol | 51.04 | 36.64 |
| CDY05638 | Canola | cytosol | 48.96 | 35.27 |
| Bra020649.1-P | Field mustard | cytosol | 48.7 | 35.15 |
| CDY33917 | Canola | cytosol | 48.44 | 34.96 |
| AT1G09270.1 | Thale cress | cytosol | 47.14 | 33.64 |
| AT4G02150.1 | Thale cress | cytosol | 46.35 | 33.52 |
| AT1G02690.2 | Thale cress | cytosol | 45.31 | 32.28 |
| AT3G05720.1 | Thale cress | cytosol | 42.71 | 31.06 |
| VIT_15s0021g00390.t01 | Wine grape | cytosol | 4.17 | 29.63 |
| AT5G03070.1 | Thale cress | cytosol, plastid | 22.92 | 16.96 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:23.5.1.3 | EntrezGene:28721258 | UniProt:A0A1P8BDF2 | ProteinID:ANM69630.1 | ProteinID:ANM69631.1 |
| ProteinID:ANM69632.1 | ProteinID:ANM69633.1 | ProteinID:ANM69634.1 | InterPro:ARM-like | InterPro:ARM-type_fold | ArrayExpress:AT5G49305 |
| EnsemblPlantsGene:AT5G49305 | EnsemblPlants:AT5G49305.2 | InterPro:Arm_3 | InterPro:Armadillo | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0006606 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008565 | GO:GO:0015031 |
| GO:GO:0061608 | InterPro:IPR000225 | InterPro:IPR011989 | RefSeq:NP_001331293.1 | RefSeq:NP_001331294.1 | RefSeq:NP_001331295.1 |
| RefSeq:NP_001331296.1 | RefSeq:NP_001331297.1 | PFAM:PF00514 | PFAM:PF16186 | PANTHER:PTHR23316 | PANTHER:PTHR23316:SF22 |
| SMART:SM00185 | SUPFAM:SSF48371 | UniParc:UPI000849410B | SEG:seg | : | : |
Description
Importin subunit alpha [Source:UniProtKB/TrEMBL;Acc:A0A1P8BDF2]
Coordinates
chr5:-:19988557..19991580
Molecular Weight (calculated)
42695.6 Da
IEP (calculated)
9.143
GRAVY (calculated)
0.067
Length
384 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLANGLYSK DPLIQLDSAI KINRILSDGM QRNLPLGTKD LIRSGIVARF VFLLHNEEFP KLQFEAARGL AIIAAFKPDV VVDHKVVPIL VTLLASSTDN
101: VRGQAILALG NVAYHPIHRD YVLQCGALTP LLIRLYKDTN LPMLRAAIRT LAFLCRGMPP STFNEVKPAL EIHLNSSDKE ILRYVCLAIS HLCYGSVDGI
201: QRVIQAGFVP KLVSVLRRPS PVLSAPELRT IGTLVTGNNH QSQLLIDANL IPSSVNLALN AELDIKREAV RVILRATVGG SPNQIKYLVQ QGCTKLLCDL
301: LVCPDIMIIK LCLYGLKNIL KAGESEKNRG DVNYYRQLID AAEGVKKIKN LLKHERNEIY DKALNILETY WDVEDDEKTQ KPPR
101: VRGQAILALG NVAYHPIHRD YVLQCGALTP LLIRLYKDTN LPMLRAAIRT LAFLCRGMPP STFNEVKPAL EIHLNSSDKE ILRYVCLAIS HLCYGSVDGI
201: QRVIQAGFVP KLVSVLRRPS PVLSAPELRT IGTLVTGNNH QSQLLIDANL IPSSVNLALN AELDIKREAV RVILRATVGG SPNQIKYLVQ QGCTKLLCDL
301: LVCPDIMIIK LCLYGLKNIL KAGESEKNRG DVNYYRQLID AAEGVKKIKN LLKHERNEIY DKALNILETY WDVEDDEKTQ KPPR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.