Factsheet for AT5G49310.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G06720.2	Thale cress	cytosol	68.02	66.35
VIT_05s0077g01430.t01	Wine grape	cytosol	67.05	65.78
KRH50772	Soybean	cytosol, endoplasmic reticulum	57.23	65.56
AT4G16143.2	Thale cress	cytosol	67.05	65.05
KRH02317	Soybean	cytosol	66.28	64.91
KRH11998	Soybean	endoplasmic reticulum	65.9	64.41
KRH37030	Soybean	endoplasmic reticulum, mitochondrion	65.51	64.03
Solyc01g060470.2.1	Tomato	extracellular	65.32	63.96
PGSC0003DMT400038784	Potato	cytosol	65.13	63.89
AT1G09270.1	Thale cress	cytosol	61.08	58.92
AT4G02150.1	Thale cress	cytosol	59.34	58.0
Zm00001d042015_P001	Maize	cytosol	18.5	57.83
AT5G52000.1	Thale cress	cytosol	47.98	56.46
AT1G02690.2	Thale cress	cytosol	58.38	56.22
AT1G32880.1	Thale cress	cytosol	19.27	54.64
AT3G05720.1	Thale cress	cytosol	51.83	50.95
AT5G49305.2	Thale cress	cytosol	36.8	49.74
Zm00001d040153_P004	Maize	cytosol	17.15	48.63
Zm00001d024033_P002	Maize	plastid	13.29	31.8
AT5G03070.1	Thale cress	cytosol, plastid	24.28	24.28

Protein Annotations

Gene3D:1.20.5.690	Gene3D:1.25.10.10	MapMan:23.5.1.3	EntrezGene:834991	ProteinID:AED95795.1	InterPro:ARM-like
InterPro:ARM-type_fold	ArrayExpress:AT5G49310	EnsemblPlantsGene:AT5G49310	RefSeq:AT5G49310	TAIR:AT5G49310	RefSeq:AT5G49310-TAIR-G
EnsemblPlants:AT5G49310.1	TAIR:AT5G49310.1	InterPro:Arm_3	InterPro:Armadillo	ProteinID:BAB10349.1	EMBL:DQ447054
GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005635	GO:GO:0005643	GO:GO:0005654	GO:GO:0005737
GO:GO:0005829	GO:GO:0006606	GO:GO:0006607	GO:GO:0006810	GO:GO:0008139	GO:GO:0008150
GO:GO:0008565	GO:GO:0015031	GO:GO:0061608	Symbol:IMPA-5	InterPro:IPR000225	InterPro:IPR002652
InterPro:IPR011989	InterPro:IPR036975	InterPro:Importin-a_IBB	InterPro:Importin-a_IBB_sf	InterPro:Importing_su_alpha	RefSeq:NP_199742.1
PFAM:PF00514	PFAM:PF01749	PFAM:PF16186	PIRSF:PIRSF005673	PO:PO:0000084	PFscan:PS50176
PFscan:PS51214	PANTHER:PTHR23316	PANTHER:PTHR23316:SF22	UniProt:Q9FJ09	SMART:SM00185	SUPFAM:SSF48371
UniParc:UPI000009D6D7	SEG:seg	:	:	:	:

Description

IMPA5Importin subunit alpha-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ09]

Coordinates

chr5:-:19991946..19994672

Molecular Weight (calculated)

58032.7 Da

IEP (calculated)

5.098

GRAVY (calculated)

-0.122

Length

519 amino acids

Sequence
(BLAST)

001: MSLRPSTKTE IRRIRYKVSV DAEEGRRRRE DFLVEIRKSK RNENLMKKRR VKVLPPDYKL ISNDPFESLL EIANMITGVF SDDPSLQLEY TTRFRVVLSF
101: DRSPPTDNVI KSGVVPRFVE FLKKDDNPKL QFEAAWALTN IASGASEHTK VVIDHGVVPL FVQLLASPDD DVREQAIWGL GNVAGDSIQC RDFVLNSGAF
201: IPLLHQLNNH ATLSILRNAT WTLSNFFRGK PSPPFDLVKH VLPVLKRLVY SDDEQVLIDA CWALSNLSDA SNENIQSVIE AGVVPRLVEL LQHASPVVLV
301: PALRCIGNIV SGNSQQTHCV INCGVLPVLA DLLTQNHMRG IRREACWTIS NITAGLEEQI QSVIDANLIP SLVNLAQHAE FDIKKEAIWA ISNASVGGSP
401: NQIKYLVEQN CIKALCDILV CPDLRIILVS LGGLEMILIA GEVDKNLRDV NCYSQMIEDA EGLEKIENLQ HHGNNEIYEK AVKILQTYGL VEEDGRLVEE
501: EDEGGDGCSH PEFQFDFSR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.