CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32422	Soybean	plastid	35.2	90.55
VIT_08s0040g02290.t01	Wine grape	cytosol	79.5	79.5
CDY55698	Canola	cytosol, plastid	74.66	74.23
PGSC0003DMT400027134	Potato	cytosol	74.27	73.85
CDY04878	Canola	plastid	74.27	73.7
AT5G03070.1	Thale cress	cytosol, plastid	73.89	73.6
Solyc10g084270.1.1	Tomato	cytosol	73.89	73.46
Bra028852.1-P	Field mustard	cytosol	73.31	71.92
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum, nucleus, plastid	69.44	68.91
CDY10407	Canola	cytosol	65.76	68.83
CDX70330	Canola	cytosol, extracellular	34.62	68.58
TraesCS3B01G152900.1	Wheat	plastid	67.12	66.22
Zm00001d008640_P002	Maize	plastid	67.12	65.97
Bra009550.1-P	Field mustard	plastid	37.14	65.75
HORVU3Hr1G025640.2	Barley	plastid	66.54	65.65
Os01t0158000-01	Rice	cytosol	65.96	64.58
TraesCS3D01G135500.2	Wheat	plastid	66.92	61.57
TraesCS3A01G309900.2	Wheat	plastid	66.73	61.39
EES02429	Sorghum	plastid	66.92	61.24
KRH37030	Soybean	endoplasmic reticulum, mitochondrion	29.79	29.0
KRH02317	Soybean	cytosol	29.59	28.87
KRH11998	Soybean	endoplasmic reticulum	29.59	28.81
KRG96743	Soybean	nucleus	29.21	28.38
KRH68461	Soybean	nucleus	29.21	28.38
KRH50772	Soybean	cytosol, endoplasmic reticulum	24.56	28.04
KRH33847	Soybean	nucleus	28.63	27.82
KRG92948	Soybean	nucleus	28.63	27.82
KRG99893	Soybean	cytosol	22.44	26.48
KRG99898	Soybean	cytosol	22.24	26.08
KRG99895	Soybean	cytosol, plastid	23.98	25.36
KRG99853	Soybean	cytosol, plastid	23.98	25.36
KRG96699	Soybean	cytosol	22.82	24.38
KRH68429	Soybean	cytosol, plastid	23.6	23.37
KRG99088	Soybean	cytosol	20.12	23.37
KRG96700	Soybean	cytosol	19.73	20.12

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100782992	MapMan:23.5.1.3	EMBL:ACUP02008209	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Armadillo	EnsemblPlantsGene:GLYMA_13G137700	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005635	GO:GO:0005643
GO:GO:0005654	GO:GO:0005737	GO:GO:0005829	GO:GO:0006606	GO:GO:0006607	GO:GO:0006810
GO:GO:0008139	GO:GO:0008150	GO:GO:0008565	GO:GO:0015031	GO:GO:0061608	UniProt:I1LZ19
InterPro:IPR000225	InterPro:IPR011989	InterPro:Importing_su_alpha	EnsemblPlants:KRH19830	ProteinID:KRH19830	ProteinID:KRH19830.1
PFAM:PF00514	PIRSF:PIRSF005673	PANTHER:PTHR23316	PANTHER:PTHR23316:SF1	SMART:SM00185	SUPFAM:SSF48371
UniParc:UPI000233AC53	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:25039130..25044938

Molecular Weight (calculated)

55878.7 Da

IEP (calculated)

5.190

GRAVY (calculated)

0.033

Length

517 amino acids

Sequence
(BLAST)

001: MADSGFTSNR RDPIKSSVGN AAASRRRQHA VTVGKERRES LMRAKRFCRV GIDGGDGGDG EVSVDSDMLI EEEQSILESQ TSAAVENLKS AIAFQGKGAV
101: KKRVGALQEL RRLLSRSEFP PVESAINAGA VPLLVQCLSF GSPDEQLLEA AWCLTNIAAG NPEETKALLP ALPLLIAHLG EKSYPPVAEQ CAWALGNVAG
201: EGEELRNVLL VQGALLPLAR MMLPNRGSTV RTAAWALSNL IKGPDPKAAT ELVRIDGVLD AIIRQLKKAD DELATEVAWV VVYLSALSNI ATSMLVKSNV
301: LELLVHKLAT SNSLQLMIPV LRSLGNLIAS DSHAIPGLGI TDNVIQVLVK CLNCENRVLK KEASWVLSNI AAGSVEHKQL IYSSEAVPVL LRLFSAAPFD
401: IRKEVAYVLG NLCVSPTKGD DKPSLILEHL VSLVEKGCLP GFIDLVRSAD IEAARLGLQF IELVLRGMPN GKGPKLVEQE DGIEAMERFQ FHENEDLRTM
501: ANTLVDKYFG EDYGLDE

Best Arabidopsis Sequence Match ( AT5G03070.1 )
(BLAST)

001: MADDGSASNR RDPIKSSVGN VAGQRRRKQA VTVAKERREL LVRAKRLCRV GTNGDVEDAL VENEMMVDEE QPILEAQASK SVEELKSAVQ YQGKGAMQKR
101: VTALRELRRL LSKSEFPPVE AALRAGAIPL LVQCLSFGSP DEQLLESAWC LTNIAAGKPE ETKALLPALP LLIAHLGEKS SAPVAEQCAW AIGNVAGEGE
201: DLRNVLLSQG ALPPLARMIF PDKGSTVRTA AWALSNLIKG PESKAAAQLV KIDGILDAIL RHLKKTDEET ATEIAWIIVY LSALSDIATS MLLKGGILQL
301: LIDRLATSSS LQLLIPVLRS LGNFVAVDPK AVLTILIREQ NTEESIIGVL AKCLRSEHRV LKKEAAWVLS NIAAGSIEHK RMIHSTEVMP LLLRILSTSP
401: FDIRKEVAYV LGNLCVESAE GDRKPRIIQE HLVSIVSGGC LRGFIELVRS PDIEAARLGL QFIELVLRGM PNGEGPKLVE GEDGIDAMER FQFHENEELR
501: VMANSLVDKY FGEDYGIDE

Arabidopsis Description

IMPA9Importin subunit alpha-9 [Source:UniProtKB/Swiss-Prot;Acc:F4KF65]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.