Factsheet for Zm00001d037606_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19061	Sorghum	cytosol	99.05	98.68
Zm00001d009850_P002	Maize	cytosol	98.11	89.93
Os05t0155601-00	Rice	nucleus	90.91	89.89
TraesCS1D01G106200.1	Wheat	cytosol	89.77	88.76
TraesCS1B01G126500.1	Wheat	cytosol	89.77	88.76
TraesCS1A01G097400.1	Wheat	nucleus	89.77	88.76
HORVU1Hr1G022750.2	Barley	plasma membrane	89.77	84.04
GSMUA_Achr3P24150_001	Banana	cytosol	82.2	81.89
GSMUA_Achr1P14770_001	Banana	cytosol	81.44	81.44
GSMUA_Achr8P06540_001	Banana	cytosol	81.82	81.36
VIT_14s0060g01510.t01	Wine grape	cytosol	80.49	80.65
KRH33847	Soybean	nucleus	80.49	79.89
KRG92948	Soybean	nucleus	80.49	79.89
Zm00001d040274_P001	Maize	cytosol	78.03	77.88
Zm00001d008345_P003	Maize	cytosol	78.03	77.74
KRH68461	Soybean	nucleus	77.65	77.07
KRG96743	Soybean	nucleus	77.65	77.07
GSMUA_Achr5P27090_001	Banana	cytosol	78.41	75.96
Zm00001d040153_P004	Maize	cytosol	25.76	74.32
Zm00001d042015_P001	Maize	cytosol	21.02	66.87
Zm00001d022536_P008	Maize	cytosol	47.54	44.19
Zm00001d024033_P002	Maize	plastid	13.64	33.18
Zm00001d008640_P002	Maize	plastid	27.46	27.57

Protein Annotations

Gene3D:1.20.5.690	Gene3D:1.25.10.10	EntrezGene:100273684	MapMan:23.5.1.3	ProteinID:AQK84432.1	ProteinID:AQK84436.1
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Arm_3	InterPro:Armadillo	EMBL:BT063489	EMBL:BT063686
UniProt:C0P5C0	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006606	GO:GO:0006810
GO:GO:0008150	GO:GO:0008565	GO:GO:0015031	GO:GO:0061608	InterPro:IPR000225	InterPro:IPR002652
InterPro:IPR011989	InterPro:IPR036975	InterPro:Importin-a_IBB	InterPro:Importin-a_IBB_sf	InterPro:Importing_su_alpha	PFAM:PF00514
PFAM:PF01749	PFAM:PF16186	PIRSF:PIRSF005673	PFscan:PS50176	PFscan:PS51214	PANTHER:PTHR23316
PANTHER:PTHR23316:SF35	SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI0001948E3B	EnsemblPlantsGene:Zm00001d037606	EnsemblPlants:Zm00001d037606_P001
EnsemblPlants:Zm00001d037606_T001	SEG:seg	:	:	:	:

Description

Importin subunit alpha

Coordinates

chr6:-:131468248..131476268

Molecular Weight (calculated)

58135.3 Da

IEP (calculated)

4.948

GRAVY (calculated)

-0.307

Length

528 amino acids

Sequence
(BLAST)

001: MSLRPSEREQ MRKGNYKQTV DAEESRRRRE GQMVDIRKAK REESLQKKRR DGFPAAGAVP PMGHSTALQQ KLDGLPAMVQ AVHSNDPTVQ LEATTQFRKL
101: LSIERSPPIE EVISTGVVPR FIEFLTREDH PQLQFEAAWA LTNIASGTSE NTKVVVESGA VPIFVKLLNS NSEDVREQAV WALGNVAGDS PKCRDLVLGH
201: GGLFPLLQQL NEHAKLSMLR NATWTLSNFC RGKPQPNFDQ VKPALPALQQ LIHSQDEEVL TDACWALSYL SDGTNDKIQA VIESGVFPRL VELLMHPSAS
301: VLIPALRTVG NIVTGDDMQT QCVIDNQALP CLLNLLTTNH KKSIKKEACW TISNITAGNR EQIQAVINAN IIAPLVQLLQ TAEFDIKKEA AWAISNATSG
401: GTHDQIKYLV AQGCIKPLCD LLVCPDPRIV TVCLEGLENI LKVGEAEKNL GAGDVNVYAQ MIDDAEGLDK IENLQSHDNT EIYEKAVKML ESYWLEEEDD
501: AMPSGDNPQN GFNFGNQPSV PSGGFNFG

Best Arabidopsis Sequence Match ( AT1G09270.2 )
(BLAST)

001: MSLRPSTRAE LRKKIYKTGV DADEARRRRE DNLVEIRKNK REDSLLKKRR EGMMLQQQLP LGAGLDGPQT AAAVEKRLEG IPMMVQGVYS DDPQAQLEAT
101: TQFRKLLSIE RSPPIDEVIK AGVIPRFVEF LGRHDHPQLQ FEAAWALTNV ASGTSDHTRV VIEQGAVPIF VKLLTSASDD VREQAVWALG NVAGDSPNCR
201: NLVLNYGALE PLLAQLNENS KLSMLRNATW TLSNFCRGKP PTPFEQVKPA LPILRQLIYL NDEEVLTDAC WALSYLSDGP NDKIQAVIEA GVCPRLVELL
301: GHQSPTVLIP ALRTVGNIVT GDDSQTQFII ESGVLPHLYN LLTQNHKKSI KKEACWTISN ITAGNKLQIE AVVGAGIILP LVHLLQNAEF DIKKEAAWAI
401: SNATSGGSHE QIQYLVTQGC IKPLCDLLIC PDPRIVTVCL EGLENILKVG EADKEMGLNS GVNLYAQIIE ESDGLDKVEN LQSHDNNEIY EKAVKILERY
501: WAEEEEEQIL QDGGNDNSQQ AFNFGNNPAA PVGGFKFA

Arabidopsis Description

IMPA4Importin subunit alpha-4 [Source:UniProtKB/Swiss-Prot;Acc:O80480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.