Factsheet for Os07t0688300-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G016300.1	Barley	cytosol	77.92	78.95
TraesCS2A01G097100.1	Wheat	cytosol	80.3	65.9
TraesCS2D01G096200.1	Wheat	cytosol	79.65	65.25
TraesCS2B01G112400.2	Wheat	cytosol	79.0	64.72
KXG36990	Sorghum	cytosol	78.14	64.12
Zm00001d022536_P008	Maize	cytosol	78.14	63.56
VIT_14s0060g00930.t01	Wine grape	cytosol	51.52	44.49
AT1G09270.1	Thale cress	cytosol	50.43	43.31
Os05t0155601-00	Rice	nucleus	50.0	43.26
PGSC0003DMT400007130	Potato	cytosol	49.78	43.07
Os01t0253300-01	Rice	cytosol	48.7	42.78
Solyc01g100720.2.1	Tomato	nucleus	49.35	42.7
CDX94988	Canola	cytosol	49.35	42.22
Bra018570.1-P	Field mustard	cytosol	49.35	42.07
CDY31102	Canola	plasma membrane	49.35	42.07
CDX93514	Canola	cytosol	49.35	42.07
CDY32165	Canola	cytosol	48.92	41.7
KRG99893	Soybean	cytosol	37.01	39.04
KRG99898	Soybean	cytosol	37.23	39.0
Os01t0343200-01	Rice	cytosol	46.97	38.48
KRG96699	Soybean	cytosol	37.45	35.74
KRG99895	Soybean	cytosol, plastid	37.66	35.58
KRG99853	Soybean	cytosol, plastid	37.66	35.58
KRH68429	Soybean	cytosol, plastid	39.39	34.87
GSMUA_Achr5P27180_001	Banana	cytosol	33.33	33.26
KRG99088	Soybean	cytosol	31.6	32.81
KRG96700	Soybean	cytosol	34.63	31.56
Bra030765.1-P	Field mustard	cytosol	49.13	30.11
Os01t0158000-01	Rice	cytosol	23.38	20.45

Protein Annotations

Gene3D:1.25.10.10	MapMan:23.5.1.3	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Arm_3	InterPro:Armadillo
ProteinID:BAF22615.1	ProteinID:BAT03313.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005635	GO:GO:0005643
GO:GO:0005654	GO:GO:0005737	GO:GO:0005829	GO:GO:0006606	GO:GO:0006607	GO:GO:0006810
GO:GO:0008139	GO:GO:0008150	GO:GO:0008565	GO:GO:0015031	GO:GO:0061608	InterPro:IPR000225
InterPro:IPR011989	InterPro:Importing_su_alpha	EnsemblPlantsGene:Os07g0688300	EnsemblPlants:Os07t0688300-01	PFAM:PF00514	PFAM:PF16186
PIRSF:PIRSF005673	PFscan:PS50176	PANTHER:PTHR23316	PANTHER:PTHR23316:SF17	UniProt:Q0D3F8	SMART:SM00185
SUPFAM:SSF48371	UniParc:UPI0000E12C90	:	:	:	:

Description

Similar to Importin alpha 1. (Os07t0688300-01);Similar to Importin alpha 1. (Os07t0688300-02)

Coordinates

chr7:-:29247838..29251970

Molecular Weight (calculated)

50231.8 Da

IEP (calculated)

4.137

GRAVY (calculated)

0.045

Length

462 amino acids

Sequence
(BLAST)

001: LEGLSEMVEK VWSDDTTSQL EATIQFRRLL SDEKNPTVIK IIRADVLPRF SDFLSRHEHP QLQMEAAWVL TNIAASDYTL LVAECGAVPR LVELLESANA
101: NIRHQAIWAL GNIAADVPTC REIVLDHGAV TPLLAQFREG MKVPVLRTAT WALSNLCFGK LPAEVQVKPI LDIISQLIHS VDEKILGDAC WALCYICDGV
201: SDGIQHVLDA GACPQLVNLL MHASANILLP VITVLARISS GDDAQVQVLV ENDILNYLAP LLARNYPKSI KKQACLIVSN ISTGSKDNIQ AVIDADVISP
301: LIFLLKTSEK DIKEEAAWAI SNAASGGSND QIQYLVSRGC LEPLCNVLTY QDADLVYACL EGLQNILQAG AVGKQGQGST VNPYAQFILE CGGLDKLEDL
401: QEVDNDAIYK LVMKLLEGYW DEEVSDDDPN LPTSNDSAET VETASEDAAQ PTEPSASPNE SE

Best Arabidopsis Sequence Match ( AT1G09270.1 )
(BLAST)

001: MSLRPSTRAE LRKKIYKTGV DADEARRRRE DNLVEIRKNK REDSLLKKRR EGMMLQQQLP LGAGLDGPQT AAAVEKRLEG IPMMVQGVYS DDPQAQLEAT
101: TQFRKLLSIE RSPPIDEVIK AGVIPRFVEF LGRHDHPQLQ FEAAWALTNV ASGTSDHTRV VIEQGAVPIF VKLLTSASDD VREQAVWALG NVAGDSPNCR
201: NLVLNYGALE PLLAQLNENS KLSMLRNATW TLSNFCRGKP PTPFEQVKPA LPILRQLIYL NDEEVLTDAC WALSYLSDGP NDKIQAVIEA GVCPRLVELL
301: GHQSPTVLIP ALRTVGNIVT GDDSQTQFII ESGVLPHLYN LLTQNHKKSI KKEACWTISN ITAGNKLQIE AVVGAGIILP LVHLLQNAEF DIKKEAAWAI
401: SNATSGGSHE QIQYLVTQGC IKPLCDLLIC PDPRIVTVCL EGLENILKVG EADKEMGLNS GVNLYAQIIE ESDGLDKVEN LQSHDNNEIY EKAVKILERY
501: WAEEEEEQIL QDGGNDNSQQ AFNFGNNPAA PVGGFKFA

Arabidopsis Description

IMPA4Importin subunit alpha-4 [Source:UniProtKB/Swiss-Prot;Acc:O80480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.