Factsheet for HORVU5Hr1G009830.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 1
nucleus 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G034750.5

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G57120.1	HORVU3Hr1G034750.5	AT4G02150.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G040600.1	Wheat	nucleus, plastid	81.94	87.07
TraesCS5B01G041800.1	Wheat	nucleus	81.56	86.84
TraesCS5D01G047700.1	Wheat	nucleus	81.56	86.49
Os12t0613500-01	Rice	nucleus	53.8	63.17
KXG23990	Sorghum	plastid	52.66	50.46
Zm00001d041495_P005	Maize	plastid	46.58	43.29
KRH02764	Soybean	nucleus	24.33	36.89
CDY52493	Canola	plastid	25.1	35.68
KRH19114	Soybean	nucleus	25.29	35.56
Bra035650.1-P	Field mustard	nucleus, plastid	24.71	34.48
CDY53983	Canola	nucleus	21.29	34.15
CDY32901	Canola	plastid	24.14	33.96
AT5G57120.1	Thale cress	nucleus	20.34	32.42
PGSC0003DMT400051236	Potato	nucleus	25.1	32.35
Solyc07g008330.2.1	Tomato	nucleus	24.71	31.63
GSMUA_Achr7P07940_001	Banana	nucleus	31.18	29.5
VIT_11s0052g00300.t01	Wine grape	nucleus	18.82	21.85

Protein Annotations

EnsemblPlants:HORVU5Hr1G009830.3	EnsemblPlantsGene:HORVU5Hr1G009830	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005730	InterPro:IPR006594	InterPro:LisH
InterPro:SRP40_C	PANTHER:PTHR23216	PFAM:PF05022	PFscan:PS50896	SEG:seg	UniParc:UPI000B4646B2
UniProt:A0A287QBV1	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:24343668..24346263

Molecular Weight (calculated)

56193.1 Da

IEP (calculated)

8.372

GRAVY (calculated)

-0.958

Length

526 amino acids

Sequence
(BLAST)

001: PSLMLFVPRQ VSLASLPSTA AAAAAAMAKE EVKKEKKSKS KGAAAKASPA PDARVLAAVA AFLESSGLPL TLAALRSEAS LEGDAWRSSP VSLADAVSKL
101: LESSASAPGA DITASDGQGS CIFVCCYELS SFGVDLVFPF DWRLPEFVDA VKADDAVAEE KGAGKKKKNK KGGLEAHETE SKAIEPSAPE KPSEKADDET
201: KEKKRKKKKD SSSAGDDAEA NAVVKTDGKK KKSKKQENDE DVEARLEKVE LAVKAKFEAA GKLKVDDKKS GEDERKSQSD EANKNVLGDG APLDKGKKKK
301: KSKSTSETSD KVDAGTAPTE VEVKSNGASE NGDAVEGKDV NEKKSKKKKR KSGSEENGLV EDKQVAGKDS APKSDDENKT AMDVEEGEDG KASADAAVVS
401: KKRKLEEVEG SKPPAKEDIT ATEDDVKEPS TASKSNKRQK LSEPKSAFQR VKSEDIKFAD ERLQDNSYWA KGGADSGYGA KAQEILGQVR GRDFRHEKTK
501: KKRGTYKGGF IDLQTHSIKF NNSDDE

Best Arabidopsis Sequence Match ( AT5G57120.1 )
(BLAST)

001: MGNESKTSAL ESEQKALLLR SVAQYLERCG FSKCFKKLLS EAEIEKKELN TSLPDLEEIF SEFLNKRDHE AAANGNTEAN VVEAVENVKK DKKKKKNKET
101: KVEVTEEEKV KETDAVIEDG VKEKKKKKET KVKVTEEEKV KETDAVIEDG VKEKKKKKSK SKSVEADDDK EKVSKKRKRS EPEETKEETE DDDEESKRRK
201: KEENVVENDE GVQETPVKET ETKENGNAEK SETKSTNQKS GKGLSNSKEP KKPFQRVNVD EIVYTENSNS YYSKGGAEIG YGLKAQEVLG QVRGRDFRHE
301: KTKKKRGSYR GGLIDQESHS TKFNNSDDEE

Arabidopsis Description

AT5g57120/MUL3_6 [Source:UniProtKB/TrEMBL;Acc:Q9LU74]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.