CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KXG32187

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G57120.1	KXG32187	AT4G02150.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041495_P005	Maize	plastid	74.86	72.61
Os12t0613500-01	Rice	nucleus	51.73	63.39
TraesCS5D01G047700.1	Wheat	nucleus	53.55	59.27
TraesCS5A01G040600.1	Wheat	nucleus, plastid	53.37	59.19
TraesCS5B01G041800.1	Wheat	nucleus	53.01	58.91
HORVU5Hr1G009830.3	Barley	nucleus	50.46	52.66
CDY52493	Canola	plastid	25.5	37.84
Bra035650.1-P	Field mustard	nucleus, plastid	25.5	37.14
CDY32901	Canola	plastid	24.95	36.63
KRH02764	Soybean	nucleus	22.59	35.73
AT5G57120.1	Thale cress	nucleus	21.31	35.45
KRH19114	Soybean	nucleus	23.68	34.76
CDY53983	Canola	nucleus	20.77	34.76
Solyc07g008330.2.1	Tomato	nucleus	24.04	32.12
PGSC0003DMT400051236	Potato	nucleus	23.68	31.86
GSMUA_Achr7P07940_001	Banana	nucleus	28.6	28.24
VIT_11s0052g00300.t01	Wine grape	nucleus	20.22	24.5

Protein Annotations

EnsemblPlants:KXG23990	EnsemblPlantsGene:SORBI_3008G169200	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005730	InterPro:IPR006594	InterPro:LisH
InterPro:SRP40_C	PANTHER:PTHR23216	PFAM:PF05022	PFscan:PS50896	ProteinID:KXG23990	ProteinID:KXG23990.1
SEG:seg	UniParc:UPI0001C806E1	UniProt:A0A1B6PE65	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr8:+:60348199..60351838

Molecular Weight (calculated)

58632.7 Da

IEP (calculated)

9.337

GRAVY (calculated)

-1.149

Length

549 amino acids

Sequence
(BLAST)

001: MLFVPRQVAL AAASSQPRAA ASAMAKEEPK KEKRSKRKAA ANGGAAVAVA PGARAAVVAS VAAFLESAGL PRTLAALQSE AGLEAGACGT SQVNLEELVA
101: KFLESSNLTP AAVVLGSSEQ GKENCDLAAE VSKENKKNGT EAGEAESKVS EPSAEEKPSE NMDGEAKEKK QKKKKKKKDN GDPSVVNAAS AEATETVKNA
201: DRKLDVDGEP KEKKQKKKKD KADPSAADAA SGEATEIVKN DDQKLDGKKK KSKKPGKDDD VEARLEKAEL AIINKFESAE KVNGDGNESR EEEPKNQNDG
301: ADDRSGAVEK KKKKKDKSSV KTSEKTGAGS APAEADGAKE KNGAVETVKN DNEKKAKKKW KKSNQEENVQ VEGKEAAEKD SVPKPDDGNK SGMDVDEEHQ
401: GKSSNENAVA GKKRKLEEVE GSIAPVTPKE DSTANQSLSN GFAEDKTNED SNIKPSKRPK KSSEPKSVTP FQRIKVDSVT FADDRLQDNS YWAKGGADTG
501: YGAKAQEILG QVKGRGFRHE KTKKKRGTYR GGQIDLQTHS IKFENSDDE

Best Arabidopsis Sequence Match ( AT5G57120.2 )
(BLAST)

001: MGNESKTSAL ESEQKALLLR SVAQYLERCG FSKCFKKLLS EAEIEKKELN TSLPDLEEIF SEFLNKRDHE AAANGNTEAN VVEAVENVKK DKKKKKNKET
101: KVEVTEEEKV KETDAVIEDG VKEKKKKKSK SKSVEADDDK EKVSKKRKRS EPEETKEETE DDDEESKRRK KEENVVENDE GVQETPVKET ETKENGNAEK
201: SETKSTNQKS GKGLSNSKEP KKPFQRVNVD EIVYTENSNS YYSKGGAEIG YGLKAQEVLG QVRGRDFRHE KTKKKRGSYR GGLIDQESHS TKFNNSDDEE

Arabidopsis Description

AT5g57120/MUL3_6 [Source:UniProtKB/TrEMBL;Acc:Q9LU74]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.