Factsheet for GSMUA_Achr7P07940_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0613500-01	Rice	nucleus	30.76	38.17
TraesCS5A01G040600.1	Wheat	nucleus, plastid	30.4	34.14
TraesCS5B01G041800.1	Wheat	nucleus	30.04	33.81
KRH02764	Soybean	nucleus	21.04	33.72
TraesCS5D01G047700.1	Wheat	nucleus	29.68	33.27
CDY53983	Canola	nucleus	19.42	32.93
Solyc07g008330.2.1	Tomato	nucleus	23.92	32.36
PGSC0003DMT400051236	Potato	nucleus	23.56	32.11
CDY52493	Canola	plastid	21.04	31.62
CDY32901	Canola	plastid	21.22	31.55
KRH19114	Soybean	nucleus	21.22	31.55
HORVU5Hr1G009830.3	Barley	nucleus	29.5	31.18
Bra035650.1-P	Field mustard	nucleus, plastid	20.5	30.24
AT5G57120.1	Thale cress	nucleus	17.81	30.0
KXG23990	Sorghum	plastid	28.24	28.6
Zm00001d041495_P005	Maize	plastid	23.38	22.97
VIT_11s0052g00300.t01	Wine grape	nucleus	17.27	21.19

Protein Annotations

EnsemblPlants:GSMUA_Achr7P07940_001	EnsemblPlants:GSMUA_Achr7T07940_001	EnsemblPlantsGene:GSMUA_Achr7G07940_001	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005730	InterPro:IPR006594
InterPro:LisH	InterPro:SRP40_C	PANTHER:PTHR23216	PFAM:PF05022	PFscan:PS50896	SEG:seg
UniParc:UPI000296F35D	UniProt:M0TFN4	MapMan:35.2	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G07940_001]

Coordinates

chr7:-:5907796..5914192

Molecular Weight (calculated)

61989.1 Da

IEP (calculated)

8.820

GRAVY (calculated)

-1.197

Length

556 amino acids

Sequence
(BLAST)

001: MLAANSAVAA VEDSKARRKE KKERKKRSSE PLHLDGTEVG EASRNGLGRD VLLRSIAAFL DGSGFSRTLS VFQSETRLEM GCWKSSSVNL EDLFCKFLDS
101: SNGHGEASID WPRDQDLQNV SIPGVVEGKN MNCTTENIHK KKRKRTDQIN DGTESEKLKM DEDLHAETKE KKKTKKLVHD PSTEGCGNKH LEVSREKAES
201: IDPANQSPDP HKNDKEKKKK LKSMPETHDE IAEPSDFANV KHKSEKKKEK KLKKVEVEAS ENISDKRFKD KKLEDTEGHS GPASENLLVH NDSQHKVKKK
301: KQKLTSDVVP TVNSNQAAEE KSGDQIKECN INQDVETSDF GAESLPKSEG MNVKVAKKPS KKGKVLPMSG ITDNETADKD SKVKSEGAEN IEETENLVKF
401: DKSALDGDTP VTTKKRKMEE SKDSNRNAGK QLELSTQANE NNSASKLKDE VVGNGSIGSN RKKENHSAEP KSVNAFQRVK IEEIKFADEK LKDNSYWAKH
501: GADTGYGAKA QEVLGQVRGR DFRHEKTKKK RGSYRGGQID LQSHSIKFSY SEDDDE

Best Arabidopsis Sequence Match ( AT5G57120.2 )
(BLAST)

001: MGNESKTSAL ESEQKALLLR SVAQYLERCG FSKCFKKLLS EAEIEKKELN TSLPDLEEIF SEFLNKRDHE AAANGNTEAN VVEAVENVKK DKKKKKNKET
101: KVEVTEEEKV KETDAVIEDG VKEKKKKKSK SKSVEADDDK EKVSKKRKRS EPEETKEETE DDDEESKRRK KEENVVENDE GVQETPVKET ETKENGNAEK
201: SETKSTNQKS GKGLSNSKEP KKPFQRVNVD EIVYTENSNS YYSKGGAEIG YGLKAQEVLG QVRGRDFRHE KTKKKRGSYR GGLIDQESHS TKFNNSDDEE

Arabidopsis Description

AT5g57120/MUL3_6 [Source:UniProtKB/TrEMBL;Acc:Q9LU74]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.