Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 6
- nucleus 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU4Hr1G024360.2 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G52560.1 | HORVU4Hr1G024360.2 | AT3G06430.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G169100.1 | Wheat | cytosol | 61.39 | 38.65 |
| Zm00001d015777_P001 | Maize | mitochondrion | 50.63 | 37.91 |
| TraesCS6A01G181700.1 | Wheat | plastid | 62.66 | 37.5 |
| TraesCS6B01G210600.1 | Wheat | mitochondrion | 61.39 | 37.31 |
| EES06474 | Sorghum | mitochondrion | 48.1 | 34.86 |
| Os02t0201000-02 | Rice | mitochondrion | 43.04 | 31.05 |
| GSMUA_Achr9P28520_001 | Banana | mitochondrion | 34.18 | 23.58 |
| Bra018972.1-P | Field mustard | cytosol | 23.42 | 19.37 |
| CDY66886 | Canola | cytosol | 23.42 | 19.37 |
| CDY40150 | Canola | mitochondrion | 25.95 | 17.67 |
| KRH44453 | Soybean | mitochondrion | 23.42 | 16.44 |
| AT1G52560.1 | Thale cress | mitochondrion | 23.42 | 15.95 |
| VIT_09s0002g06790.t01 | Wine grape | mitochondrion | 22.78 | 15.45 |
| PGSC0003DMT400073689 | Potato | mitochondrion | 19.62 | 13.54 |
| CDY66885 | Canola | mitochondrion | 1.9 | 12.5 |
| HORVU4Hr1G063350.1 | Barley | mitochondrion | 17.09 | 8.88 |
| KRH47454 | Soybean | cytosol | 2.53 | 4.35 |
| Solyc12g042830.1.1 | Tomato | plastid | 1.27 | 2.53 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G038320.1 | EnsemblPlantsGene:HORVU6Hr1G038320 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009408 | GO:GO:0009628 |
| InterPro:HSP20 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF173 | SEG:seg | UniParc:UPI0002954E71 | UniProt:M0VMD9 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:-:194660244..194661372
Molecular Weight (calculated)
17067.2 Da
IEP (calculated)
11.882
GRAVY (calculated)
-0.622
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MALARLCLRT ALAGRAAATA RPASASSRGR LDLRSLFSSA AADSAAAKAP LEGETNRREV AVADRSSSAT ARGGRWPWRD LRDLAPFRLV NGLGSALSHV
101: AETLSRPLER WRPLFGKVRE DEERYRLRFE VPGLGKDDRA GHRGGRRAGH PGREEGGG
101: AETLSRPLER WRPLFGKVRE DEERYRLRFE VPGLGKDDRA GHRGGRRAGH PGREEGGG
001: MALARLALRN LQQKLSPSLM GQSCERGLVG NRHNPMKLNR FMATSAGEQE DKMNTEVSVS EKKSPRQNFP RRRGRKSLWR NTDDHGYFTP TLNGNTLIQA
101: TENMNRIFDN FNVNPFQLMG QVKEQDDCYK LRYEVPGLTK EDVKITVNDG ILTIKGDHKA EEEKGSPEED EYWSSKSYGY YNTSLSLPDD AKVEDIKAEL
201: KNGVLNLVIP RTEKPKKNVQ EISVE
101: TENMNRIFDN FNVNPFQLMG QVKEQDDCYK LRYEVPGLTK EDVKITVNDG ILTIKGDHKA EEEKGSPEED EYWSSKSYGY YNTSLSLPDD AKVEDIKAEL
201: KNGVLNLVIP RTEKPKKNVQ EISVE
Arabidopsis Description
HSP26.526.5 kDa heat shock protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SSQ8]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.