Factsheet for HORVU4Hr1G063350.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G225400.1	Wheat	plastid	73.03	91.36
TraesCS4A01G068200.1	Wheat	mitochondrion	67.43	86.13
TraesCS4D01G226000.1	Wheat	mitochondrion	66.78	85.29
EER95179	Sorghum	plastid	62.5	77.87
Zm00001d028408_P001	Maize	plastid	57.24	72.5
Os03t0245800-02	Rice	plastid	55.26	70.0
GSMUA_Achr2P12540_001	Banana	plastid	38.49	49.79
PGSC0003DMT400008351	Potato	plastid	37.17	48.5
VIT_16s0098g01060.t01	Wine grape	plastid	36.18	48.46
KRH64320	Soybean	plastid	36.51	48.05
CDY55343	Canola	plastid	34.87	47.32
CDY30235	Canola	plastid	34.87	47.32
CDY19036	Canola	plastid	34.87	47.32
Solyc03g082420.2.1	Tomato	plastid	36.51	47.23
Bra026317.1-P	Field mustard	plastid	34.54	46.88
KRH53604	Soybean	plastid	35.53	46.75
AT4G27670.1	Thale cress	plastid	33.55	44.93
GSMUA_Achr4P28560_001	Banana	plastid	32.24	41.18
Os03t0835700-00	Rice	plastid	17.76	29.03
HORVU6Hr1G038320.1	Barley	mitochondrion	8.88	17.09

Protein Annotations

MapMan:19.1.8.11	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	GO:GO:0000427	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0006355	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009408
GO:GO:0009416	GO:GO:0009536	GO:GO:0009628	GO:GO:0009644	GO:GO:0009658	GO:GO:0009987
GO:GO:0016043	GO:GO:0042542	GO:GO:0042644	GO:GO:0043621	GO:GO:0101031	EnsemblPlantsGene:HORVU4Hr1G063350
EnsemblPlants:HORVU4Hr1G063350.1	InterPro:HSP20	InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978	UniProt:M0Z6T1
PFAM:PF00011	PFscan:PS01031	PANTHER:PTHR11527	PANTHER:PTHR11527:SF167	SUPFAM:SSF49764	UniParc:UPI0002948421
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:530910255..530911640

Molecular Weight (calculated)

33422.9 Da

IEP (calculated)

7.082

GRAVY (calculated)

-0.450

Length

304 amino acids

Sequence
(BLAST)

001: MYSPPLYKRG AAPLASSHQA HTEIQFDVAH RLPNTNDLLE TISVSLLSHL DRLPIALSGA MAAATAPFAL VSRLSPAARL PIRAWRAARP APLWTGRTRP
101: LSVASAAQEN TDSSVDVQVS QDRNAGNQQG NAVQRRPRRA AGFDISPFGL VDPMSPMRTM KQMLDTMDRL FDDAVGFPTA RRSPAAAAGE MPRMPWDIME
201: DDKEVKMRFD MPGLSREEVK VMVEDDALVI RGEHKKEAGE GQGEAAGGGD GWWKERSVSS YDMRLALPDE CDKSQVRAEL KNGVLLVSVP KRETERKVID
301: VQVQ

Best Arabidopsis Sequence Match ( AT4G27670.1 )
(BLAST)

001: MASTLSFAAS ALCSPLAPSP SVSSKSATPF SVSFPRKIPS RIRAQDQREN SIDVVQQGQQ KGNQGSSVEK RPQQRLTMDV SPFGLLDPLS PMRTMRQMLD
101: TMDRMFEDTM PVSGRNRGGS GVSEIRAPWD IKEEEHEIKM RFDMPGLSKE DVKISVEDNV LVIKGEQKKE DSDDSWSGRS VSSYGTRLQL PDNCEKDKIK
201: AELKNGVLFI TIPKTKVERK VIDVQIQ

Arabidopsis Description

HSP21HSP21 [Source:UniProtKB/TrEMBL;Acc:A0A178UVU5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.