Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P12540_001 | Banana | plastid | 55.88 | 56.6 |
| CDY30235 | Canola | plastid | 38.66 | 41.07 |
| CDY55343 | Canola | plastid | 38.66 | 41.07 |
| Bra026317.1-P | Field mustard | plastid | 38.24 | 40.62 |
| CDY19036 | Canola | plastid | 38.24 | 40.62 |
| AT4G27670.1 | Thale cress | plastid | 38.24 | 40.09 |
| TraesCS4D01G226000.1 | Wheat | mitochondrion | 39.92 | 39.92 |
| KRH64320 | Soybean | plastid | 38.24 | 39.39 |
| Os03t0245800-02 | Rice | plastid | 39.5 | 39.17 |
| TraesCS4B01G225400.1 | Wheat | plastid | 39.92 | 39.09 |
| PGSC0003DMT400008351 | Potato | plastid | 38.24 | 39.06 |
| KRH53604 | Soybean | plastid | 37.82 | 38.96 |
| EER95179 | Sorghum | plastid | 39.92 | 38.93 |
| TraesCS4A01G068300.1 | Wheat | plastid | 39.08 | 38.91 |
| VIT_16s0098g01060.t01 | Wine grape | plastid | 36.97 | 38.77 |
| Solyc03g082420.2.1 | Tomato | plastid | 37.82 | 38.3 |
| TraesCS4A01G068200.1 | Wheat | mitochondrion | 38.24 | 38.24 |
| Zm00001d028408_P001 | Maize | plastid | 38.24 | 37.92 |
| HORVU4Hr1G063350.1 | Barley | mitochondrion | 41.18 | 32.24 |
| GSMUA_Achr1P17060_001 | Banana | plastid | 29.41 | 31.96 |
| GSMUA_Achr10P... | Banana | cytosol | 25.21 | 30.93 |
| Os03t0835700-00 | Rice | plastid | 14.29 | 18.28 |
| GSMUA_Achr9P28520_001 | Banana | mitochondrion | 16.39 | 17.03 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P28560_001 | EnsemblPlants:GSMUA_Achr4T28560_001 | EnsemblPlantsGene:GSMUA_Achr4G28560_001 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom | InterPro:HSP20 |
| InterPro:HSP20-like_chaperone | InterPro:IPR002068 | InterPro:IPR008978 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF167 | PFAM:PF00011 |
| PFscan:PS01031 | SEG:seg | SUPFAM:SSF49764 | UniParc:UPI0002960A4B | UniProt:M0SSW8 | MapMan:19.1.8.11 |
Description
Putative Small heat shock protein, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr4G28560_001]
Coordinates
chr4:+:26955181..26956205
Molecular Weight (calculated)
26218.7 Da
IEP (calculated)
7.516
GRAVY (calculated)
-0.371
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMAAASSLV LAGPPSLLSG QALRPTQRHP STVALPSPSC RRRLRISAEA APQGTGEGTE KTDAINVRFE KDGNKQHEAS AIDRQPRRWA FDVSPLALVD
101: TMSPMWTMKR MLETMERLFQ ESMSLPGSSV VEMRRPLEIK ETDDEIRLRF DMPGLSKDDV KVSVEGDMLL IKGENKVKEE VAAGGEGAGW SSASYHMRFM
201: LPDNCDKQAV TAELKNGVLL VVVPKTKTDR KVLNVEIL
101: TMSPMWTMKR MLETMERLFQ ESMSLPGSSV VEMRRPLEIK ETDDEIRLRF DMPGLSKDDV KVSVEGDMLL IKGENKVKEE VAAGGEGAGW SSASYHMRFM
201: LPDNCDKQAV TAELKNGVLL VVVPKTKTDR KVLNVEIL
001: MASTLSFAAS ALCSPLAPSP SVSSKSATPF SVSFPRKIPS RIRAQDQREN SIDVVQQGQQ KGNQGSSVEK RPQQRLTMDV SPFGLLDPLS PMRTMRQMLD
101: TMDRMFEDTM PVSGRNRGGS GVSEIRAPWD IKEEEHEIKM RFDMPGLSKE DVKISVEDNV LVIKGEQKKE DSDDSWSGRS VSSYGTRLQL PDNCEKDKIK
201: AELKNGVLFI TIPKTKVERK VIDVQIQ
101: TMDRMFEDTM PVSGRNRGGS GVSEIRAPWD IKEEEHEIKM RFDMPGLSKE DVKISVEDNV LVIKGEQKKE DSDDSWSGRS VSSYGTRLQL PDNCEKDKIK
201: AELKNGVLFI TIPKTKVERK VIDVQIQ
Arabidopsis Description
HSP21HSP21 [Source:UniProtKB/TrEMBL;Acc:A0A178UVU5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.