Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 60.73 | 68.56 |
| VIT_01s0010g02290.t01 | Wine grape | cytosol | 51.14 | 61.54 |
| KRG97479 | Soybean | cytosol | 40.18 | 58.67 |
| Solyc05g014280.2.1 | Tomato | plastid | 50.68 | 50.23 |
| PGSC0003DMT400031252 | Potato | plastid | 51.14 | 49.56 |
| KRH31411 | Soybean | cytosol, plastid | 50.23 | 46.81 |
| TraesCS5D01G266000.1 | Wheat | plastid | 46.12 | 40.89 |
| TraesCS5B01G257000.1 | Wheat | plastid | 44.29 | 39.43 |
| TraesCS5A01G257700.1 | Wheat | plastid | 44.75 | 39.36 |
| Zm00001d031325_P001 | Maize | plastid | 42.92 | 37.3 |
| KXG25677 | Sorghum | plastid | 44.29 | 36.06 |
| GSMUA_Achr2P12540_001 | Banana | plastid | 32.88 | 30.64 |
| GSMUA_Achr4P28560_001 | Banana | plastid | 31.96 | 29.41 |
| GSMUA_Achr9P28520_001 | Banana | mitochondrion | 18.26 | 17.47 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P17060_001 | EnsemblPlants:GSMUA_Achr1T17060_001 | EnsemblPlantsGene:GSMUA_Achr1G17060_001 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom | InterPro:HSP20 |
| InterPro:HSP20-like_chaperone | InterPro:IPR002068 | InterPro:IPR008978 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF137 | PFAM:PF00011 |
| PFscan:PS01031 | SEG:seg | SUPFAM:SSF49764 | UniParc:UPI0002952A42 | UniProt:M0S0L4 | MapMan:35.1 |
Description
Putative Small heat shock protein, chloroplastic (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr1G17060_001]
Coordinates
chr1:-:12733771..12734677
Molecular Weight (calculated)
24618.5 Da
IEP (calculated)
9.597
GRAVY (calculated)
-0.528
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLALSSFSP SSVLLSTRRG PINCGRWHIT AMGTQSRDNL DHMQRASKPQ QSQPLLKRRA APSSPIGLWD RFPTARTIQQ MMDTMERVME DPLAYGGASL
101: PSLSGEDSVG SYRRRRTPWE IKEGAGEYRM RFDMPGMTKK DVKVWVEERL LVIEAEKLPA KEGEAEEWSA TSYGRYSSRI ALPDNVLVEQ IKAEVKDGVL
201: YITIPKASTS TKVLDIDVR
101: PSLSGEDSVG SYRRRRTPWE IKEGAGEYRM RFDMPGMTKK DVKVWVEERL LVIEAEKLPA KEGEAEEWSA TSYGRYSSRI ALPDNVLVEQ IKAEVKDGVL
201: YITIPKASTS TKVLDIDVR
001: MASTLSFAAS ALCSPLAPSP SVSSKSATPF SVSFPRKIPS RIRAQDQREN SIDVVQQGQQ KGNQGSSVEK RPQQRLTMDV SPFGLLDPLS PMRTMRQMLD
101: TMDRMFEDTM PVSGRNRGGS GVSEIRAPWD IKEEEHEIKM RFDMPGLSKE DVKISVEDNV LVIKGEQKKE DSDDSWSGRS VSSYGTRLQL PDNCEKDKIK
201: AELKNGVLFI TIPKTKVERK VIDVQIQ
101: TMDRMFEDTM PVSGRNRGGS GVSEIRAPWD IKEEEHEIKM RFDMPGLSKE DVKISVEDNV LVIKGEQKKE DSDDSWSGRS VSSYGTRLQL PDNCEKDKIK
201: AELKNGVLFI TIPKTKVERK VIDVQIQ
Arabidopsis Description
HSP21HSP21 [Source:UniProtKB/TrEMBL;Acc:A0A178UVU5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.